Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 Y_RNA.39-201ENST00000362620 98 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 RNU6-1210P-201ENST00000363775 107 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 SNORA38.1-201ENST00000364172 131 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.216-201ENST00000364205 93 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.405-201ENST00000383979 100 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.451-201ENST00000384200 100 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.524-201ENST00000384564 100 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.561-201ENST00000384694 100 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 MIR491-201ENST00000384877 84 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AC104332.2-201ENST00000429959 156 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 MTCO3P29-201ENST00000432119 779 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AF186996.7-201ENST00000492781 209 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 SNORA25.10-201ENST00000515926 124 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 RNA5SP385-201ENST00000515947 110 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 SNORA70.24-201ENST00000517233 118 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AC144568.1-201ENST00000520139 137 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AC006504.6-201ENST00000590142 199 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AC092447.9-201ENST00000603395 144 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM54Q9BYV2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.40-201ENST00000362645 93 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 RNU6-1159P-201ENST00000362933 107 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 RNU5B-2P-201ENST00000363036 113 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 SNORD115-32-201ENST00000364079 82 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.364-201ENST00000365532 101 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 SNORD21-201ENST00000383953 95 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 SNORA9-201ENST00000384215 133 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 RNY1P14-201ENST00000384426 108 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.496-201ENST00000384444 101 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 MTND4P19-201ENST00000446659 478 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AL118496.2-201ENST00000448300 230 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 GSTA11P-201ENST00000452866 669 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC096576.1-201ENST00000489014 359 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 HMGB1P35-201ENST00000503360 598 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 RNU5F-2P-201ENST00000516066 82 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 RNU2-53P-201ENST00000516257 147 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 SNORA74D-201ENST00000516404 141 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 SNORA31.16-201ENST00000516773 139 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM54Q9BYV2 UBL5P2-201ENST00000583788 219 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC022432.1-201ENST00000595739 310 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 AL034555.1-201ENST00000604816 211 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC007179.3-201ENST00000604976 235 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 RMST_6.1-201ENST00000611980 203 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC040896.1-201ENST00000613819 479 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC007485.1-201ENST00000616755 206 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC091925.1-201ENST00000623204 462 ntBASIC3□□□□□ -1.93
TRIM54Q9BYV2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3□□□□□ -1.93
TRIM54Q9BYV2 AC009487.2-201ENST00000420969 6821 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.148-201ENST00000363557 117 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 SNORA33.2-201ENST00000365413 134 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 RNU6-639P-201ENST00000384074 107 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 SNORA36A-201ENST00000384221 132 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 RNVU1-14-201ENST00000384770 164 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 MIR32-201ENST00000384965 70 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 MIR153-2-201ENST00000385225 87 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 MIR1289-1-201ENST00000408836 144 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 Y_RNA.605-201ENST00000410577 105 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 AC012306.1-201ENST00000423267 114 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 Z82188.1-201ENST00000436709 154 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 AL121594.1-201ENST00000475906 575 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 SCARNA15.1-201ENST00000516384 125 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 RNU6-56P-201ENST00000516986 93 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 AC091144.1-201ENST00000519573 138 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 AC027176.1-201ENST00000560204 514 ntBASIC2.99□□□□□ -1.93
TRIM54Q9BYV2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms