Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AIMP1P2-201ENST00000425294 312 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN2AQ99250 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.67□□□□□ -2.14
SCN2AQ99250 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.67□□□□□ -2.14
SCN2AQ99250 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN2AQ99250 BNIP3P6-201ENST00000549284 499 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN2AQ99250 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SCN2AQ99250 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN2AQ99250 MIR378A-201ENST00000362177 66 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 Y_RNA.238-201ENST00000364441 102 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 MIR544A-201ENST00000384855 91 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SCN2AQ99250 SNORA16.2-201ENST00000390991 127 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 SNORA12-201ENST00000391162 147 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 RNA5SP270-201ENST00000411361 118 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN2AQ99250 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN2AQ99250 AC008267.5-201ENST00000424928 265 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 AL591043.1-201ENST00000432461 424 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 AC006026.2-201ENST00000457376 180 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 SCARNA18-201ENST00000459004 134 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 MED28P2-201ENST00000475771 317 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 AC108729.3-201ENST00000513484 108 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 RNA5SP401-201ENST00000515920 127 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 RNU6-377P-201ENST00000515965 102 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN2AQ99250 CENPUP1-201ENST00000526649 1202 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.67□□□□□ -2.14
SCN2AQ99250 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SCN2AQ99250 AL355297.2-201ENST00000604792 129 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 ELOCP5-201ENST00000604924 333 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 uc_338.15-201ENST00000615470 191 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 AC131280.1-202ENST00000624067 4211 ntBASIC1.67□□□□□ -2.14
SCN2AQ99250 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SCN2AQ99250 Y_RNA.256-201ENST00000364594 104 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 U3.13-201ENST00000364804 214 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SCN2AQ99250 Y_RNA.453-201ENST00000384223 109 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 RNU6-541P-201ENST00000384709 110 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SCN2AQ99250 RN7SKP158-201ENST00000410453 326 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 RNU2-63P-201ENST00000410792 194 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN2AQ99250 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN2AQ99250 RNU2-69P-201ENST00000516061 100 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 MIR3672-201ENST00000584290 82 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC008752.3-201ENST00000588113 712 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AL138963.2-201ENST00000605137 226 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 MIR6840-201ENST00000611937 71 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC073869.6-201ENST00000640656 341 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.66□□□□□ -2.14
SCN2AQ99250 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 RNU6-428P-201ENST00000362942 107 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 RNU6-486P-201ENST00000363116 107 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 RNU6-715P-201ENST00000365204 103 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC019129.1-201ENST00000403786 261 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC010975.2-201ENST00000427781 588 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 MTCO3P18-201ENST00000440206 761 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 MTCO2P3-201ENST00000442543 421 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.66□□□□□ -2.14
SCN2AQ99250 SNORA43.2-201ENST00000516652 128 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 MTND1P5-201ENST00000517906 940 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AP005902.1-201ENST00000521358 186 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
SCN2AQ99250 AC104458.1-201ENST00000608243 463 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AL133215.3-201ENST00000609801 448 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 MIR3662-201ENST00000637030 95 ntBASIC1.66□□□□□ -2.14
SCN2AQ99250 AC121333.1-201ENST00000567488 2709 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 RNU6-944P-201ENST00000364023 107 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 RNU6-1141P-201ENST00000364520 107 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 RNU6-877P-201ENST00000383868 107 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 RPS29P13-201ENST00000402041 169 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN2AQ99250 AC007969.2-201ENST00000441891 191 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN2AQ99250 AL353752.1-201ENST00000454946 260 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 AP001324.2-201ENST00000461163 319 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN2AQ99250 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.65□□□□□ -2.15
SCN2AQ99250 AC026371.1-201ENST00000551867 419 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN2AQ99250 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.65□□□□□ -2.15
SCN2AQ99250 MIR5692C1-201ENST00000585309 91 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 AC107304.1-201ENST00000604229 296 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 AC092954.2-201ENST00000609103 430 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 SDR42E1P4-201ENST00000620894 481 ntBASIC1.65□□□□□ -2.15
SCN2AQ99250 AC084768.2-201ENST00000622736 221 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms