Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 DEFB130D-201ENST00000426866 237 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 MTCO3P29-201ENST00000432119 779 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 MTCO3P18-201ENST00000440206 761 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 MTND5P14-201ENST00000441481 1267 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 MTCO3P7-201ENST00000510008 774 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 SNORD60.2-201ENST00000516883 86 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 BNIP3P6-201ENST00000549284 499 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 AC060771.1-201ENST00000582031 164 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 SNORD3E-202ENST00000627253 216 ntBASIC0.24□□□□□ -2.37
CDK5RAP2Q96SN8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 GXYLT1P1-201ENST00000446657 490 ntBASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 AC003071.1-201ENST00000451219 789 ntBASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 AC016256.1-201ENST00000547971 354 ntBASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 MIR3136-201ENST00000583498 78 ntBASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 GHRLOS.1-201ENST00000610995 70 ntBASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.23□□□□□ -2.37
CDK5RAP2Q96SN8 AL158050.1-201ENST00000416077 457 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC123900.1-201ENST00000420390 96 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AL365338.1-201ENST00000422282 858 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 DEFB131D-201ENST00000526803 184 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC007834.2-201ENST00000536310 343 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC078795.2-201ENST00000602835 1252 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC130324.3-201ENST00000614165 542 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AL138726.1-201ENST00000614873 333 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AL159152.1-201ENST00000635019 2587 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 SNORD12-201ENST00000391002 90 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 RNA5SP111-201ENST00000411386 101 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC016831.2-201ENST00000417179 352 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 ELOCP9-201ENST00000418624 239 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 MRPS36P1-201ENST00000421291 307 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 MTCYBP5-201ENST00000423752 1135 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC113410.1-201ENST00000505029 247 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 MIR1273C-201ENST00000578669 77 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 MIR4293-201ENST00000584305 78 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC146944.4-201ENST00000602697 718 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC174048.1-201ENST00000603389 144 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 MIR6516-201ENST00000630554 81 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 AC106858.1-201ENST00000637497 429 ntBASIC0.22□□□□□ -2.37
CDK5RAP2Q96SN8 RNU6-1123P-201ENST00000362347 106 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 AC013262.1-201ENST00000426710 252 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 SEPT7P5-201ENST00000434048 306 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 DEFB108A-201ENST00000530110 222 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 MIR4709-201ENST00000577272 72 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 MIR3912-201ENST00000577566 105 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 MIR5589-201ENST00000579442 60 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 AL353778.1-201ENST00000603149 408 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 SNRPGP20-201ENST00000604477 205 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 AP001596.2-201ENST00000608410 312 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 AC016911.1-201ENST00000613297 452 ntBASIC0.21□□□□□ -2.38
CDK5RAP2Q96SN8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 MIR16-2-201ENST00000362117 81 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RNA5SP259-201ENST00000365541 109 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-395P-201ENST00000365662 106 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 Y_RNA.471-201ENST00000384312 102 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 MTCO1P3-201ENST00000429327 192 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 EEF1E1P1-201ENST00000446998 430 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC104629.1-201ENST00000494226 508 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC091163.3-201ENST00000518269 1144 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC025423.5-201ENST00000550230 219 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 SCARNA4-202ENST00000625402 129 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-212P-201ENST00000362642 104 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RNU4-79P-201ENST00000362764 141 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 Y_RNA.132-201ENST00000363421 102 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 MIR548B-201ENST00000385247 97 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RNU4-22P-201ENST00000411058 166 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 Y_RNA.623-201ENST00000411128 95 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RPS3AP1-201ENST00000413190 320 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 RPS25P9-201ENST00000435591 252 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AL606662.1-201ENST00000445763 553 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 TRBVB-201ENST00000477100 408 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC026414.1-201ENST00000504046 698 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC025678.1-201ENST00000567861 338 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 EIF1P4-201ENST00000572664 335 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 MIR5190-201ENST00000581537 80 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 AC068620.3-201ENST00000602749 560 ntBASIC0.2□□□□□ -2.38
CDK5RAP2Q96SN8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
CDK5RAP2Q96SN8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.19□□□□□ -2.38
CDK5RAP2Q96SN8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms