Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MIR4667-201ENST00000578933 66 ntBASIC0.14□□□□□ -2.39
IFT140Q96RY7 RNU6-952P-201ENST00000391164 108 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 SNORA40C-201ENST00000391285 128 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 AL035398.1-201ENST00000430869 322 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 AC073910.1-201ENST00000445047 438 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 snoU13.19-201ENST00000459148 104 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
IFT140Q96RY7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
IFT140Q96RY7 HMGB1P30-201ENST00000492455 606 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 RPF2P2-201ENST00000504693 896 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.13□□□□□ -2.39
IFT140Q96RY7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.13□□□□□ -2.39
IFT140Q96RY7 AC012557.2-201ENST00000605919 418 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 AC017083.3-201ENST00000609955 700 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 PCMTD1P7-201ENST00000634506 357 ntBASIC0.13□□□□□ -2.39
IFT140Q96RY7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.13□□□□□ -2.39
IFT140Q96RY7 RNU6-166P-201ENST00000384371 107 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.12□□□□□ -2.39
IFT140Q96RY7 ELOCP9-201ENST00000418624 239 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 MTND2P9-201ENST00000422293 931 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC013262.1-201ENST00000426710 252 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.12□□□□□ -2.39
IFT140Q96RY7 RNFT1P2-201ENST00000443064 757 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 ELOCP30-201ENST00000447108 299 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 RPL39P38-201ENST00000467018 153 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC104692.1-201ENST00000472406 90 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 RPL39P36-201ENST00000490784 156 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC105758.1-201ENST00000506038 399 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 SUMO2P16-201ENST00000519475 264 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.12□□□□□ -2.39
IFT140Q96RY7 BNIP3P6-201ENST00000549284 499 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 MIR4709-201ENST00000577272 72 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC068620.3-201ENST00000602749 560 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC253576.2-201ENST00000618815 580 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 AC120349.2-201ENST00000625002 298 ntBASIC0.12□□□□□ -2.39
IFT140Q96RY7 RNU6-969P-201ENST00000383900 105 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 AF228730.1-201ENST00000397972 663 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 RNA5SP390-201ENST00000410191 113 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 LARP1BP3-201ENST00000437229 869 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 MTND4P25-201ENST00000441039 533 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 MTND1P30-201ENST00000441241 901 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.11□□□□□ -2.39
IFT140Q96RY7 AC113410.1-201ENST00000505029 247 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 ZNF971P-201ENST00000562068 1249 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 KATNBL1P5-201ENST00000605015 517 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 AC093913.1-201ENST00000614178 329 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.11□□□□□ -2.39
IFT140Q96RY7 AC006001.4-201ENST00000622243 395 ntBASIC0.11□□□□□ -2.39
IFT140Q96RY7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.11□□□□□ -2.39
IFT140Q96RY7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
IFT140Q96RY7 SNORA80D-201ENST00000384488 135 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AL359634.1-202ENST00000404721 284 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 ARL5AP1-201ENST00000418991 388 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC245047.7-201ENST00000440265 293 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC069257.2-201ENST00000441819 155 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 SNRPEP8-201ENST00000442866 260 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC022493.2-201ENST00000506122 481 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC023632.1-201ENST00000518463 375 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.1□□□□□ -2.39
IFT140Q96RY7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.1□□□□□ -2.39
IFT140Q96RY7 AP002906.1-201ENST00000603405 233 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.1□□□□□ -2.39
IFT140Q96RY7 MIR340-201ENST00000362125 95 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 RNU6-1123P-201ENST00000362347 106 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 MIR301A-201ENST00000385261 86 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
IFT140Q96RY7 AL590623.1-201ENST00000427864 105 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC233266.1-201ENST00000454518 96 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 RNU7-136P-201ENST00000458819 69 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC092325.1-201ENST00000566449 554 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AL031281.1-201ENST00000604049 488 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AL358072.1-201ENST00000604156 575 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC242852.1-201ENST00000612151 96 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC005332.6-201ENST00000613178 446 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 AC244015.1-201ENST00000622301 99 ntBASIC0.1□□□□□ -2.39
IFT140Q96RY7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.09□□□□□ -2.39
IFT140Q96RY7 Y_RNA.363-201ENST00000365529 113 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 RNU6-932P-201ENST00000391108 106 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 AC011233.1-201ENST00000422812 283 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 USP9YP14-201ENST00000430663 563 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.09□□□□□ -2.4
IFT140Q96RY7 SNORA76.2-201ENST00000517095 137 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.09□□□□□ -2.4
IFT140Q96RY7 AC092106.3-201ENST00000611308 722 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 Pinc.1-201ENST00000616452 154 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 AL159152.1-201ENST00000635019 2587 ntBASIC0.09□□□□□ -2.4
IFT140Q96RY7 AC107982.1-201ENST00000507171 1300 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 AC090625.1-201ENST00000357130 210 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 SNORD3E-201ENST00000362899 217 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 RNU1-119P-201ENST00000391122 165 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 MTCO3P41-201ENST00000414801 328 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.08□□□□□ -2.4
IFT140Q96RY7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.08□□□□□ -2.4
IFT140Q96RY7 SEPT7P5-201ENST00000434048 306 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 FABP5P4-201ENST00000437203 171 ntBASIC0.08□□□□□ -2.4
IFT140Q96RY7 AL606662.1-201ENST00000445763 553 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms