Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC060766.3-201ENST00000591442 263 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 AC019159.1-201ENST00000605094 187 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 AC006157.1-201ENST00000611750 366 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 AC098657.3-201ENST00000620434 263 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 AC002064.3-201ENST00000623448 346 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 AC022418.1-201ENST00000624118 445 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SNED1Q8TER0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SNED1Q8TER0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.61□□□□□ -1.99
SNED1Q8TER0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SNED1Q8TER0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SNED1Q8TER0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
SNED1Q8TER0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.61□□□□□ -1.99
SNED1Q8TER0 MTND5P30-201ENST00000452896 1731 ntBASIC2.61□□□□□ -1.99
SNED1Q8TER0 RNU1-105P-201ENST00000363470 161 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 Y_RNA.269-201ENST00000364685 89 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 Y_RNA.399-201ENST00000383955 105 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 Y_RNA.452-201ENST00000384202 108 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNU6-198P-201ENST00000384258 104 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNA5SP354-201ENST00000391247 136 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 MTCYBP9-201ENST00000431021 303 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.6□□□□□ -1.99
SNED1Q8TER0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.6□□□□□ -1.99
SNED1Q8TER0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.6□□□□□ -1.99
SNED1Q8TER0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNU7-167P-201ENST00000459160 62 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 MTATP8P1-201ENST00000467115 207 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.6□□□□□ -1.99
SNED1Q8TER0 RPL36AP21-201ENST00000490372 323 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 RAC1P5-201ENST00000512182 576 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNU6-1069P-201ENST00000516612 133 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNU6-56P-201ENST00000516986 93 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNU1-54P-201ENST00000517181 120 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNU6-323P-201ENST00000521915 107 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC090115.3-201ENST00000553218 849 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.6□□□□□ -1.99
SNED1Q8TER0 BNIP3P16-201ENST00000589779 534 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC011494.1-201ENST00000596454 237 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 VN1R107P-201ENST00000601784 209 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC174048.1-201ENST00000603389 144 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AL137847.3-201ENST00000611521 109 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC011890.2-201ENST00000613393 294 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 AC007485.1-201ENST00000616755 206 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 MTND5P7-201ENST00000413558 1798 ntBASIC2.6□□□□□ -1.99
SNED1Q8TER0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNED1Q8TER0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SNED1Q8TER0 RNU6-1115P-201ENST00000362490 106 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 Y_RNA.47-201ENST00000362697 108 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 Y_RNA.364-201ENST00000365532 101 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 RNU6-128P-201ENST00000383976 107 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 RNU6-890P-201ENST00000384121 107 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 Y_RNA.463-201ENST00000384271 102 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 Y_RNA.473-201ENST00000384333 102 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 Y_RNA.527-201ENST00000384573 102 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 RNU6-907P-201ENST00000390924 102 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 NDUFS5P1-201ENST00000405668 289 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 MIR1302-3-201ENST00000408128 138 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 RNU6-1050P-201ENST00000410388 107 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 NDUFB4P7-201ENST00000423198 363 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC124916.1-201ENST00000444020 547 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 RPL12P25-201ENST00000455592 494 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC015911.1-201ENST00000495111 156 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 RNU6-1016P-201ENST00000516689 94 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 Y_RNA.708-201ENST00000516950 96 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC026371.1-201ENST00000551867 419 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 MTCO3P23-201ENST00000561363 289 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC073539.2-201ENST00000597113 165 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AL355598.1-201ENST00000604169 202 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC009229.3-201ENST00000608056 282 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 FAM157A-202ENST00000615155 405 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AL359547.2-201ENST00000615810 418 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AL162373.1-201ENST00000620433 407 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 MIR6132-201ENST00000622083 109 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AC110079.1-202ENST00000635213 138 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 AL137003.2-201ENST00000606924 2538 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -1.99
SNED1Q8TER0 CDC27P3-201ENST00000635418 1910 ntBASIC2.59□□□□□ -1.99
SNED1Q8TER0 Y_RNA.149-201ENST00000363558 117 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 Y_RNA.193-201ENST00000363979 102 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 SNORA23-201ENST00000365128 182 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 RNU6-715P-201ENST00000365204 103 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.59□□□□□ -2
SNED1Q8TER0 Y_RNA.404-201ENST00000383978 102 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 RNU6-505P-201ENST00000384427 107 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 Y_RNA.557-201ENST00000384680 107 ntBASIC2.59□□□□□ -2
SNED1Q8TER0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms