Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 MIR144-201ENST00000384886 86 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 MIR186-201ENST00000384988 86 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.37□□□□□ -2.03
CPSF7Q8N684 MTND3P9-201ENST00000429526 346 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF7Q8N684 MTND4P18-201ENST00000447010 465 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 MTND1P17-201ENST00000448961 204 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 PCMTD1P1-201ENST00000455560 355 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 AC103851.1-201ENST00000506833 274 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 AC008413.1-201ENST00000511864 177 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF7Q8N684 RNU1-41P-201ENST00000516161 162 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 RNU1-48P-201ENST00000516400 162 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 RNA5SP24-201ENST00000516478 95 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.37□□□□□ -2.03
CPSF7Q8N684 AP001836.1-201ENST00000604675 523 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF7Q8N684 AC064859.1-201ENST00000624741 174 ntBASIC2.37□□□□□ -2.03
CPSF7Q8N684 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF7Q8N684 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CPSF7Q8N684 MTND4P27-201ENST00000450813 1354 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CPSF7Q8N684 Y_RNA.184-201ENST00000363884 108 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 U3.13-201ENST00000364804 214 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 RNU6-43P-201ENST00000384302 107 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CPSF7Q8N684 AP000275.1-201ENST00000411943 390 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 EIF4EP4-201ENST00000424916 578 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 HMGB1P18-201ENST00000438801 619 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AL031659.1-201ENST00000447075 539 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 MTND5P20-201ENST00000448677 143 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
CPSF7Q8N684 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.36□□□□□ -2.03
CPSF7Q8N684 AC114801.2-201ENST00000503825 781 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.36□□□□□ -2.03
CPSF7Q8N684 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AP005902.1-201ENST00000521358 186 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.36□□□□□ -2.03
CPSF7Q8N684 AC091135.1-201ENST00000585943 307 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AC069294.1-201ENST00000608397 350 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AL133215.3-201ENST00000609801 448 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 AC092794.2-201ENST00000620933 563 ntBASIC2.36□□□□□ -2.03
CPSF7Q8N684 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.36□□□□□ -2.03
CPSF7Q8N684 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC135776.4-201ENST00000624300 1904 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CPSF7Q8N684 RNU6-227P-201ENST00000362865 103 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 MIR521-1-201ENST00000384902 87 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 MIR517A-201ENST00000385001 87 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 BTF3L4P2-201ENST00000392798 346 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 MIR548F5-201ENST00000408421 86 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 U6atac.2-201ENST00000408644 118 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC092427.1-202ENST00000430569 476 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 USP9YP8-201ENST00000441913 500 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC140059.1-201ENST00000489238 361 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 MTND5P5-201ENST00000503764 376 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 RNU6-237P-201ENST00000515985 71 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 RNU2-53P-201ENST00000516257 147 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 Y_RNA.702-201ENST00000516843 96 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 RN7SKP40-201ENST00000517211 242 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC134698.4-201ENST00000523451 826 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 CPDP1-201ENST00000579660 283 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC105245.1-201ENST00000581934 244 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 MIR3616-201ENST00000584070 92 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC243960.4-201ENST00000600532 288 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AL161423.1-201ENST00000613700 262 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.35□□□□□ -2.03
CPSF7Q8N684 MIR6128-201ENST00000615528 109 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AL159153.1-201ENST00000619688 317 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 U4.3-201ENST00000621047 82 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CPSF7Q8N684 TPTEP1-208ENST00000636884 213 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CPSF7Q8N684 MTND4P12-201ENST00000498999 1377 ntBASIC2.35□□□□□ -2.03
CPSF7Q8N684 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CPSF7Q8N684 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CPSF7Q8N684 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CPSF7Q8N684 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.03
CPSF7Q8N684 AC009541.1-201ENST00000438279 2662 ntBASIC2.34□□□□□ -2.03
CPSF7Q8N684 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CPSF7Q8N684 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CPSF7Q8N684 Y_RNA.40-201ENST00000362645 93 ntBASIC2.34□□□□□ -2.03
CPSF7Q8N684 RNU6-655P-201ENST00000362858 107 ntBASIC2.34□□□□□ -2.03
CPSF7Q8N684 RNU6-1141P-201ENST00000364520 107 ntBASIC2.34□□□□□ -2.03
CPSF7Q8N684 SNORD32A-201ENST00000364805 84 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms