Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR3651-201ENST00000630427 90 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR1244-3-201ENST00000635744 85 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR1244-2-201ENST00000636449 85 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MIR1244-4-202ENST00000636813 85 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 AC009541.1-201ENST00000438279 2662 ntBASIC2.62□□□□□ -1.99
CLIP4Q8N3C7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.424-201ENST00000384063 103 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.455-201ENST00000384230 98 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 MIR625-201ENST00000385047 85 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 RNA5SP494-201ENST00000410653 129 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC007098.1-201ENST00000420122 367 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 CHEK2P4-201ENST00000450340 246 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 RNU7-169P-201ENST00000459456 61 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 MTATP8P1-201ENST00000467115 207 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC103975.1-201ENST00000482506 483 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC006199.1-201ENST00000548728 219 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC024581.2-201ENST00000619986 252 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC002064.3-201ENST00000623448 346 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC110079.1-202ENST00000635213 138 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC008669.1-201ENST00000565823 2178 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 AC000403.1-201ENST00000613696 3585 ntBASIC2.61□□□□□ -1.99
CLIP4Q8N3C7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.144-201ENST00000363521 113 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 RNU4-42P-201ENST00000364738 142 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 RNU6-101P-201ENST00000410323 104 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 RNU2-49P-201ENST00000410666 184 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 RPL23AP83-201ENST00000434984 473 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL031659.1-201ENST00000447075 539 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC003982.1-202ENST00000469928 248 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 RNU6-475P-201ENST00000516073 104 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.721-201ENST00000517207 102 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC144568.1-201ENST00000520139 137 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL590705.4-201ENST00000532209 134 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL117187.1-201ENST00000555482 181 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC008269.2-201ENST00000561915 1105 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC009163.5-201ENST00000575421 637 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL161756.2-201ENST00000604597 246 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC019159.1-201ENST00000605094 187 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL162274.2-201ENST00000614406 332 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AL132822.1-201ENST00000617063 513 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 AC087588.2-201ENST00000617667 426 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 MIR4272-201ENST00000635924 64 ntBASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
CLIP4Q8N3C7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AC073346.2-201ENST00000624724 2058 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RNU6-450P-201ENST00000364654 107 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RNU1-140P-201ENST00000365040 165 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RNU1-109P-201ENST00000383960 147 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 MIR23A-201ENST00000385245 73 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 HMGB3P2-201ENST00000411913 584 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AC009414.1-201ENST00000427200 443 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AC007969.2-201ENST00000441891 191 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RPS3AP12-201ENST00000443616 753 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AC012308.1-201ENST00000451232 178 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AC112492.4-201ENST00000456549 352 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RN7SKP210-201ENST00000459176 261 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 MED28P2-201ENST00000475771 317 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RPS29P26-201ENST00000477483 171 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RPL30P10-201ENST00000488148 337 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RPS27P26-201ENST00000494583 239 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 RAC1P5-201ENST00000512182 576 ntBASIC2.59□□□□□ -1.99
CLIP4Q8N3C7 AC091826.1-201ENST00000514065 313 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms