Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 SNORA69.1-201ENST00000390904 137 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 RNU2-63P-201ENST00000410792 194 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 RNU7-87P-201ENST00000459343 62 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AC090515.1-201ENST00000465295 476 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 ANXA2P1-201ENST00000505539 926 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 SNORA31.15-201ENST00000516771 132 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 RNA5SP54-201ENST00000516951 92 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 RNU6-988P-201ENST00000519081 107 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AC091144.1-201ENST00000519573 138 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 MIR3670-2-201ENST00000582974 65 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 MIR3670-1-201ENST00000584160 65 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 MIR3670-3-201ENST00000584855 65 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AC092447.9-201ENST00000603395 144 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 MIR3670-4-201ENST00000612260 65 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AL449363.1-201ENST00000617815 186 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 AL354798.1-201ENST00000622505 329 ntBASIC2.73□□□□□ -1.97
CCDC28AQ8IWP9 MIR372-201ENST00000362225 67 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 Y_RNA.39-201ENST00000362620 98 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 Y_RNA.202-201ENST00000364083 110 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 RNU4-42P-201ENST00000364738 142 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 RNY1P14-201ENST00000384426 108 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 U3.19-201ENST00000390893 196 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 UBA52P6-201ENST00000399822 382 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 Y_RNA.605-201ENST00000410577 105 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 Y_RNA.625-201ENST00000411256 107 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 MCFD2P1-201ENST00000417812 300 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 USP9YP16-201ENST00000430287 407 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AL161788.1-201ENST00000441805 169 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 USP9YP23-201ENST00000455085 407 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC007215.1-201ENST00000464893 276 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AL163540.1-201ENST00000485382 386 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 RN7SKP40-201ENST00000517211 242 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC027288.2-201ENST00000553028 243 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AL356575.1-201ENST00000603008 283 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC006157.1-201ENST00000611750 366 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC083806.3-201ENST00000614016 455 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC087588.2-201ENST00000617667 426 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AL138825.1-201ENST00000618587 192 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC243829.7-201ENST00000633081 225 ntBASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC28AQ8IWP9 MTND5P16-201ENST00000460269 1703 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 MIR30B-201ENST00000384850 88 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 MIR95-201ENST00000385072 81 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 RN7SKP263-201ENST00000411194 309 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 MTND4P19-201ENST00000446659 478 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 AP000870.1-201ENST00000472927 406 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 RNU6-58P-201ENST00000517143 103 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 AP003072.1-201ENST00000531740 145 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 AC090617.3-201ENST00000573670 475 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 MIR5685-201ENST00000579080 79 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.71□□□□□ -1.98
CCDC28AQ8IWP9 MFSD8-233ENST00000641482 4860 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 MAPK10-266ENST00000641066 6555 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 SNORD56.5-201ENST00000364281 72 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 SNORA22B-201ENST00000383876 138 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 MIR487A-201ENST00000385009 80 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 RNU1-139P-201ENST00000391307 165 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 MIR320B2-201ENST00000408479 138 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 Y_RNA.592-201ENST00000410274 109 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 AC003685.2-201ENST00000422795 395 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 CBX3P6-201ENST00000430257 527 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 CST9LP2-201ENST00000437612 320 ntBASIC2.7□□□□□ -1.98
CCDC28AQ8IWP9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms