Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RN7SKP49-201ENST00000516675 260 ntBASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 MIR4765-201ENST00000585007 77 ntBASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 MIR3922-201ENST00000585192 84 ntBASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 AC244505.7-201ENST00000599675 272 ntBASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 AC091953.5-201ENST00000622919 233 ntBASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPAS4Q8IUM7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 Y_RNA.44-201ENST00000362676 108 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 Y_RNA.122-201ENST00000363331 96 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 RNY4P28-201ENST00000365281 93 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 CD24P4-201ENST00000382840 243 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 RNU6-926P-201ENST00000384075 107 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 MIR10B-201ENST00000385011 110 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 AL033519.2-201ENST00000403958 392 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 ATP5A1P2-201ENST00000412323 255 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 WARS2P1-201ENST00000429678 537 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 RPS29P26-201ENST00000477483 171 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 AC109925.1-201ENST00000478069 331 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 SEPT14P8-201ENST00000508026 178 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 SNORD116-28-201ENST00000516123 91 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 AL078605.1-201ENST00000603529 500 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 SNRPGP20-201ENST00000604477 205 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 AL137843.1-201ENST00000605078 385 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 AC005520.5-201ENST00000613926 164 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 MIR7975-201ENST00000619350 68 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 AC110774.1-201ENST00000623567 2018 ntBASIC4.11□□□□□ -1.75
NPAS4Q8IUM7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 RNU4-90P-201ENST00000362773 141 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 RNU6-245P-201ENST00000384020 107 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 MIR491-201ENST00000384877 84 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 MIR218-2-201ENST00000385006 110 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 RNU6-651P-201ENST00000411040 105 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 AC097463.2-201ENST00000421074 142 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 PPBPP1-201ENST00000510807 373 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 CYCSP23-201ENST00000519781 313 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 AP006245.1-201ENST00000522549 120 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 Z83818.1-201ENST00000603584 150 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 MZT1P2-201ENST00000604387 248 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 AC004832.4-201ENST00000608952 331 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 GABRG2-229ENST00000641017 3628 ntBASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.1□□□□□ -1.75
NPAS4Q8IUM7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 RNU6-486P-201ENST00000363116 107 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 RNU6-740P-201ENST00000364734 105 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 AC112220.1-201ENST00000434628 355 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 AC069285.2-201ENST00000440210 275 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 AL049830.2-201ENST00000480072 201 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 SNORA74D-201ENST00000516404 141 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 SNORA70.24-201ENST00000517233 118 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 MIR7154-201ENST00000620673 73 ntBASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPAS4Q8IUM7 AL049781.1-201ENST00000623195 3585 ntBASIC4.09□□□□□ -1.76
NPAS4Q8IUM7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPAS4Q8IUM7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 RNU6-1020P-201ENST00000363684 107 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 Y_RNA.286-201ENST00000364813 102 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 Y_RNA.292-201ENST00000364904 97 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 CBX3P9-201ENST00000402326 552 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 SNORD12B-201ENST00000410433 91 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 AC009414.1-201ENST00000427200 443 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms