Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNU6-28P-201ENST00000362378 107 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 RNU6-858P-201ENST00000362436 107 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 RNU6-1019P-201ENST00000364424 107 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 RNU6-1176P-201ENST00000390955 107 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 MTCO2P31-201ENST00000402702 684 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 MTND1P21-201ENST00000412991 285 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.03□□□□□ -2.4
HMGXB3Q12766 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.03□□□□□ -2.4
HMGXB3Q12766 snoU13.8-201ENST00000458890 104 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 AC026410.2-201ENST00000460281 156 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 AC048334.1-201ENST00000477975 159 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.4
HMGXB3Q12766 RNU6-390P-201ENST00000516259 103 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 AC093012.1-202ENST00000549403 582 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 AC092106.3-201ENST00000611308 722 ntBASIC0.03□□□□□ -2.4
HMGXB3Q12766 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.03□□□□□ -2.4
HMGXB3Q12766 RNU6-654P-201ENST00000364373 107 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 SNORA27.3-201ENST00000364937 134 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
HMGXB3Q12766 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.03□□□□□ -2.41
HMGXB3Q12766 Y_RNA.597-201ENST00000410463 100 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.03□□□□□ -2.41
HMGXB3Q12766 BTF3P11-201ENST00000426582 477 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 FABP5P4-201ENST00000437203 171 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC020550.1-201ENST00000447385 163 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 PAXBP1P1-201ENST00000449315 447 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC233266.1-201ENST00000454518 96 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.03□□□□□ -2.41
HMGXB3Q12766 RN7SKP12-201ENST00000516275 143 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 SNORD60.2-201ENST00000516883 86 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 RN7SKP258-201ENST00000517151 304 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.03□□□□□ -2.41
HMGXB3Q12766 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC009712.1-201ENST00000564938 316 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AL162730.1-201ENST00000605734 292 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC091946.2-201ENST00000606105 291 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AL360219.1-201ENST00000610230 366 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC242852.1-201ENST00000612151 96 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 TUG1_2.1-201ENST00000614234 87 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 AC244015.1-201ENST00000622301 99 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 PCMTD1P7-201ENST00000634506 357 ntBASIC0.03□□□□□ -2.41
HMGXB3Q12766 SNORA80D-201ENST00000384488 135 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 Y_RNA.548-201ENST00000384656 105 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 COX6CP10-201ENST00000416832 224 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 MTCO1P57-201ENST00000432182 261 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 MTCYBP15-201ENST00000433123 1127 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 AL008629.1-201ENST00000438615 184 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 RAD1P2-201ENST00000446414 663 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 snoU13.30-201ENST00000458951 104 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.02□□□□□ -2.41
HMGXB3Q12766 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.02□□□□□ -2.41
HMGXB3Q12766 AP002906.1-201ENST00000603405 233 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 AP000811.1-201ENST00000603803 651 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 AC107905.1-201ENST00000616204 426 ntBASIC0.02□□□□□ -2.41
HMGXB3Q12766 SNORA63D-201ENST00000364359 132 ntBASIC0.01□□□□□ -2.41
HMGXB3Q12766 RNU6-512P-201ENST00000364438 103 ntBASIC0.01□□□□□ -2.41
HMGXB3Q12766 AL139421.1-201ENST00000423010 169 ntBASIC0.01□□□□□ -2.41
HMGXB3Q12766 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.01□□□□□ -2.41
HMGXB3Q12766 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.01□□□□□ -2.41
HMGXB3Q12766 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.01□□□□□ -2.41
HMGXB3Q12766 AC136618.2-201ENST00000575091 400 ntBASIC0.01□□□□□ -2.41
HMGXB3Q12766 AC004987.4-201ENST00000603383 338 ntBASIC0.01□□□□□ -2.41
HMGXB3Q12766 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.01□□□□□ -2.41
HMGXB3Q12766 RNU6-674P-201ENST00000363831 107 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 Y_RNA.332-201ENST00000365271 113 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 SNORD89-201ENST00000390981 114 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0□□□□□ -2.41
HMGXB3Q12766 AL035398.1-201ENST00000430869 322 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 MTATP6P30-201ENST00000443540 664 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 snoU13.21-201ENST00000459368 105 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 RPL39P38-201ENST00000467018 153 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0□□□□□ -2.41
HMGXB3Q12766 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0□□□□□ -2.41
HMGXB3Q12766 AC025627.3-201ENST00000582078 182 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 AC022022.2-201ENST00000602989 360 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0□□□□□ -2.41
HMGXB3Q12766 MIR3529-201ENST00000637713 78 ntBASIC0□□□□□ -2.41
HMGXB3Q12766 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 RNU4-9P-201ENST00000364951 139 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 RNU6-432P-201ENST00000384196 109 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 RNU6-950P-201ENST00000384651 107 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AL590556.1-201ENST00000423231 483 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AC245047.7-201ENST00000440265 293 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AC069257.2-201ENST00000441819 155 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.01□□□□□ -2.41
HMGXB3Q12766 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.01□□□□□ -2.41
HMGXB3Q12766 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.01□□□□□ -2.41
HMGXB3Q12766 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AL442163.3-201ENST00000554110 156 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AL356157.2-201ENST00000605122 111 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 AL451064.1-201ENST00000607718 471 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 U4.2-201ENST00000618561 85 ntBASIC-0.01□□□□□ -2.41
HMGXB3Q12766 RNU4-32P-201ENST00000363404 141 ntBASIC-0.02□□□□□ -2.41
HMGXB3Q12766 RNU6-188P-201ENST00000364207 107 ntBASIC-0.02□□□□□ -2.41
HMGXB3Q12766 RNU6-969P-201ENST00000383900 105 ntBASIC-0.02□□□□□ -2.41
HMGXB3Q12766 RNU6-40P-201ENST00000384254 107 ntBASIC-0.02□□□□□ -2.41
HMGXB3Q12766 AF228730.1-201ENST00000397972 663 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms