Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AP005902.1-201ENST00000521358 186 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK3Q00526 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK3Q00526 IMMP1LP2-201ENST00000552954 492 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK3Q00526 AL356575.1-201ENST00000603008 283 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDK3Q00526 RN7SL853P-201ENST00000617250 223 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC008121.3-201ENST00000618726 433 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 AC064859.1-201ENST00000624741 174 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 SNORD98-201ENST00000636377 67 ntBASIC2.33□□□□□ -2.04
CDK3Q00526 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDK3Q00526 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CDK3Q00526 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK3Q00526 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CDK3Q00526 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK3Q00526 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK3Q00526 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.33□□□□□ -2.04
CDK3Q00526 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.32□□□□□ -2.04
CDK3Q00526 Y_RNA.301-201ENST00000364990 103 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 RNU6-1283P-201ENST00000365314 105 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 RNU6-790P-201ENST00000384479 105 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 Y_RNA.504-201ENST00000384481 104 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 FGF7P8-201ENST00000402994 292 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 AL133396.1-201ENST00000432048 687 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.32□□□□□ -2.04
CDK3Q00526 PPP1R2P5-201ENST00000457256 603 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.32□□□□□ -2.04
CDK3Q00526 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.32□□□□□ -2.04
CDK3Q00526 AC016632.1-201ENST00000503994 196 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.32□□□□□ -2.04
CDK3Q00526 CPDP1-201ENST00000579660 283 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 MIR4742-201ENST00000581069 85 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.32□□□□□ -2.04
CDK3Q00526 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.32□□□□□ -2.04
CDK3Q00526 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.32□□□□□ -2.04
CDK3Q00526 AL034555.1-201ENST00000604816 211 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 RBM11P1-201ENST00000604951 799 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 MIR3976-201ENST00000606807 139 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.32□□□□□ -2.04
CDK3Q00526 AP000560.1-201ENST00000624150 1937 ntBASIC2.32□□□□□ -2.04
CDK3Q00526 DEFA7P-201ENST00000382676 285 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 RNU6-767P-201ENST00000384132 107 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDK3Q00526 SNORA3.2-201ENST00000408221 125 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 MTND3P8-201ENST00000412909 339 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.31□□□□□ -2.04
CDK3Q00526 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK3Q00526 MTCO3P46-201ENST00000425787 232 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AC078809.1-201ENST00000427601 140 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK3Q00526 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.31□□□□□ -2.04
CDK3Q00526 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.31□□□□□ -2.04
CDK3Q00526 PCMTD1P1-201ENST00000455560 355 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 HMGB1P35-201ENST00000503360 598 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AC022447.4-201ENST00000504053 364 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 SNORA31.16-201ENST00000516773 139 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 RNU6-566P-201ENST00000516790 107 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 RNA5SP454-201ENST00000517231 127 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK3Q00526 MIR5007-201ENST00000583098 95 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AC060766.3-201ENST00000591442 263 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AL133215.3-201ENST00000609801 448 ntBASIC2.31□□□□□ -2.04
CDK3Q00526 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.31□□□□□ -2.04
CDK3Q00526 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDK3Q00526 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CDK3Q00526 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CDK3Q00526 AC092268.1-201ENST00000342691 405 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 RNU6-1274P-201ENST00000384557 107 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 MIR517A-201ENST00000385001 87 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 MIR95-201ENST00000385072 81 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 HMGN2P35-201ENST00000412164 270 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.3□□□□□ -2.04
CDK3Q00526 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.3□□□□□ -2.04
CDK3Q00526 GPM6BP3-201ENST00000442797 145 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.3□□□□□ -2.04
CDK3Q00526 TRBV12-1-201ENST00000479785 344 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.3□□□□□ -2.04
CDK3Q00526 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.3□□□□□ -2.04
CDK3Q00526 AP005639.2-201ENST00000527592 928 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 MIR3136-201ENST00000583498 78 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 MIR4298-201ENST00000584380 73 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 MIR8076-201ENST00000611401 83 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 SNORA43.4-201ENST00000629559 138 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 AC099654.14-201ENST00000638599 341 ntBASIC2.3□□□□□ -2.04
CDK3Q00526 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
CDK3Q00526 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDK3Q00526 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDK3Q00526 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDK3Q00526 MIR21-201ENST00000362134 72 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 Y_RNA.123-201ENST00000363338 102 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 RNU4-56P-201ENST00000364700 142 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 Y_RNA.279-201ENST00000364763 95 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 Y_RNA.390-201ENST00000383932 102 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 MIR29B2-201ENST00000385055 81 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AL591034.2-201ENST00000402839 359 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 HMGB3P2-201ENST00000411913 584 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 RPL21P111-201ENST00000418453 477 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AL139396.1-201ENST00000421137 167 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms