Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC104564.1-201ENST00000493028 407 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.28□□□□□ -2.04
CDH13P55290 IGLV3-17-201ENST00000519099 244 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH13P55290 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH13P55290 AC118273.2-201ENST00000532092 465 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AC021269.2-201ENST00000532318 330 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH13P55290 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.28□□□□□ -2.04
CDH13P55290 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.28□□□□□ -2.04
CDH13P55290 AC078795.3-201ENST00000602913 472 ntBASIC2.28□□□□□ -2.04
CDH13P55290 BNIP3P10-201ENST00000605360 577 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AL133215.3-201ENST00000609801 448 ntBASIC2.28□□□□□ -2.04
CDH13P55290 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
CDH13P55290 SCARNA15.3-201ENST00000626315 122 ntBASIC2.28□□□□□ -2.04
CDH13P55290 SCARNA4.1-201ENST00000628597 123 ntBASIC2.28□□□□□ -2.04
CDH13P55290 SNORA43.4-201ENST00000629559 138 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AL450472.1-202ENST00000637286 180 ntBASIC2.28□□□□□ -2.04
CDH13P55290 AC009541.1-201ENST00000438279 2662 ntBASIC2.28□□□□□ -2.04
CDH13P55290 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDH13P55290 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDH13P55290 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CDH13P55290 RNU4-15P-201ENST00000362613 141 ntBASIC2.27□□□□□ -2.05
CDH13P55290 Y_RNA.248-201ENST00000364501 109 ntBASIC2.27□□□□□ -2.05
CDH13P55290 SNORD116-11-201ENST00000383882 92 ntBASIC2.27□□□□□ -2.05
CDH13P55290 RNU6-546P-201ENST00000383991 107 ntBASIC2.27□□□□□ -2.05
CDH13P55290 RNU6-831P-201ENST00000384548 107 ntBASIC2.27□□□□□ -2.05
CDH13P55290 RNU6-95P-201ENST00000384697 107 ntBASIC2.27□□□□□ -2.05
CDH13P55290 RNU6-510P-201ENST00000391239 108 ntBASIC2.27□□□□□ -2.05
CDH13P55290 MTCYBP2-201ENST00000407745 171 ntBASIC2.27□□□□□ -2.05
CDH13P55290 RNU6-1148P-201ENST00000410992 104 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.27□□□□□ -2.05
CDH13P55290 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH13P55290 RPS15AP28-201ENST00000435088 386 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH13P55290 MTND4LP16-201ENST00000440828 295 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC011753.1-201ENST00000451001 220 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AL139109.1-201ENST00000455491 297 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC068781.1-201ENST00000488231 618 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC018868.1-201ENST00000491307 315 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC069439.1-201ENST00000494739 167 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC091874.1-201ENST00000511402 339 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC022616.8-201ENST00000533569 253 ntBASIC2.27□□□□□ -2.05
CDH13P55290 NDUFA5P6-201ENST00000542110 379 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.27□□□□□ -2.05
CDH13P55290 MIR3923-201ENST00000579521 83 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AC093913.1-201ENST00000614178 329 ntBASIC2.27□□□□□ -2.05
CDH13P55290 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.27□□□□□ -2.05
CDH13P55290 AL136221.1-201ENST00000621449 509 ntBASIC2.27□□□□□ -2.05
CDH13P55290 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDH13P55290 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
CDH13P55290 Y_RNA.72-201ENST00000362894 103 ntBASIC2.26□□□□□ -2.05
CDH13P55290 Y_RNA.86-201ENST00000363020 111 ntBASIC2.26□□□□□ -2.05
CDH13P55290 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDH13P55290 Y_RNA.504-201ENST00000384481 104 ntBASIC2.26□□□□□ -2.05
CDH13P55290 RNU2-32P-201ENST00000411193 191 ntBASIC2.26□□□□□ -2.05
CDH13P55290 MTND3P9-201ENST00000429526 346 ntBASIC2.26□□□□□ -2.05
CDH13P55290 GPM6BP3-201ENST00000442797 145 ntBASIC2.26□□□□□ -2.05
CDH13P55290 MTND1P11-201ENST00000456661 876 ntBASIC2.26□□□□□ -2.05
CDH13P55290 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.26□□□□□ -2.05
CDH13P55290 SNORA31.16-201ENST00000516773 139 ntBASIC2.26□□□□□ -2.05
CDH13P55290 AC034114.1-201ENST00000520293 285 ntBASIC2.26□□□□□ -2.05
CDH13P55290 MIR3942-201ENST00000585264 109 ntBASIC2.26□□□□□ -2.05
CDH13P55290 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
CDH13P55290 AL022345.1-201ENST00000607292 135 ntBASIC2.26□□□□□ -2.05
CDH13P55290 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDH13P55290 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDH13P55290 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
CDH13P55290 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.25□□□□□ -2.05
CDH13P55290 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
CDH13P55290 RNU6-944P-201ENST00000364023 107 ntBASIC2.25□□□□□ -2.05
CDH13P55290 RNU6-611P-201ENST00000384276 104 ntBASIC2.25□□□□□ -2.05
CDH13P55290 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CDH13P55290 Y_RNA.597-201ENST00000410463 100 ntBASIC2.25□□□□□ -2.05
CDH13P55290 AC009963.1-201ENST00000417265 157 ntBASIC2.25□□□□□ -2.05
CDH13P55290 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH13P55290 DAP3P1-201ENST00000441522 278 ntBASIC2.25□□□□□ -2.05
CDH13P55290 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.25□□□□□ -2.05
CDH13P55290 RNU7-187P-201ENST00000458985 68 ntBASIC2.25□□□□□ -2.05
CDH13P55290 CYP4A27P-201ENST00000567218 190 ntBASIC2.25□□□□□ -2.05
CDH13P55290 AL078605.1-201ENST00000603529 500 ntBASIC2.25□□□□□ -2.05
CDH13P55290 AC005520.5-201ENST00000613926 164 ntBASIC2.25□□□□□ -2.05
CDH13P55290 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
CDH13P55290 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.25□□□□□ -2.05
CDH13P55290 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDH13P55290 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
CDH13P55290 SNORD32B-201ENST00000364460 84 ntBASIC2.24□□□□□ -2.05
CDH13P55290 RNU6-784P-201ENST00000384330 106 ntBASIC2.24□□□□□ -2.05
CDH13P55290 RNA5SP201-201ENST00000410316 124 ntBASIC2.24□□□□□ -2.05
CDH13P55290 RNU2-48P-201ENST00000410694 191 ntBASIC2.24□□□□□ -2.05
CDH13P55290 RPL30P16-201ENST00000419341 429 ntBASIC2.24□□□□□ -2.05
CDH13P55290 MTCO3P46-201ENST00000425787 232 ntBASIC2.24□□□□□ -2.05
CDH13P55290 MTND1P2-201ENST00000430604 821 ntBASIC2.24□□□□□ -2.05
CDH13P55290 IFNA20P-201ENST00000436840 528 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH13P55290 PCMTD1P1-201ENST00000455560 355 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AC130509.1-201ENST00000464158 433 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AC132942.1-201ENST00000486753 483 ntBASIC2.24□□□□□ -2.05
CDH13P55290 AC145146.1-201ENST00000496370 254 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms