Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC099654.5-201ENST00000636479 350 ntBASIC2.33□□□□□ -2.04
CDH11P55287 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CDH11P55287 MTND5P30-201ENST00000452896 1731 ntBASIC2.33□□□□□ -2.04
CDH11P55287 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
CDH11P55287 AC080128.1-201ENST00000474389 1917 ntBASIC2.32□□□□□ -2.04
CDH11P55287 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH11P55287 SNORD50.1-201ENST00000362987 71 ntBASIC2.32□□□□□ -2.04
CDH11P55287 SNORD114-19-201ENST00000363072 75 ntBASIC2.32□□□□□ -2.04
CDH11P55287 RNU4-73P-201ENST00000363164 141 ntBASIC2.32□□□□□ -2.04
CDH11P55287 RNU6-1059P-201ENST00000363752 98 ntBASIC2.32□□□□□ -2.04
CDH11P55287 RNU6-461P-201ENST00000364195 107 ntBASIC2.32□□□□□ -2.04
CDH11P55287 RNU6-1141P-201ENST00000364520 107 ntBASIC2.32□□□□□ -2.04
CDH11P55287 SET-203ENST00000372688 801 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH11P55287 RN7SKP61-201ENST00000410642 295 ntBASIC2.32□□□□□ -2.04
CDH11P55287 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.32□□□□□ -2.04
CDH11P55287 EIF4EP4-201ENST00000424916 578 ntBASIC2.32□□□□□ -2.04
CDH11P55287 AC008267.5-201ENST00000424928 265 ntBASIC2.32□□□□□ -2.04
CDH11P55287 MTND3P9-201ENST00000429526 346 ntBASIC2.32□□□□□ -2.04
CDH11P55287 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH11P55287 AC093027.1-201ENST00000546698 429 ntBASIC2.32□□□□□ -2.04
CDH11P55287 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH11P55287 AC011494.1-201ENST00000596454 237 ntBASIC2.32□□□□□ -2.04
CDH11P55287 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH11P55287 AC019193.3-201ENST00000609144 554 ntBASIC2.32□□□□□ -2.04
CDH11P55287 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH11P55287 MIR1302-1-201ENST00000637932 143 ntBASIC2.32□□□□□ -2.04
CDH11P55287 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CDH11P55287 Z75746.1-201ENST00000440243 2080 ntBASIC2.32□□□□□ -2.04
CDH11P55287 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH11P55287 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH11P55287 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CDH11P55287 RNU4-82P-201ENST00000362443 140 ntBASIC2.31□□□□□ -2.04
CDH11P55287 RNU6-784P-201ENST00000384330 106 ntBASIC2.31□□□□□ -2.04
CDH11P55287 RNU1-57P-201ENST00000384491 166 ntBASIC2.31□□□□□ -2.04
CDH11P55287 Y_RNA.509-201ENST00000384506 99 ntBASIC2.31□□□□□ -2.04
CDH11P55287 RNU6-601P-201ENST00000384540 107 ntBASIC2.31□□□□□ -2.04
CDH11P55287 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
CDH11P55287 MIR186-201ENST00000384988 86 ntBASIC2.31□□□□□ -2.04
CDH11P55287 MT-TD-201ENST00000387419 68 ntBASIC2.31□□□□□ -2.04
CDH11P55287 SNORA26.3-201ENST00000391119 136 ntBASIC2.31□□□□□ -2.04
CDH11P55287 RNU6-1245P-201ENST00000411130 106 ntBASIC2.31□□□□□ -2.04
CDH11P55287 RPL30P4-201ENST00000429309 333 ntBASIC2.31□□□□□ -2.04
CDH11P55287 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH11P55287 AC124916.1-201ENST00000444020 547 ntBASIC2.31□□□□□ -2.04
CDH11P55287 AC012308.1-201ENST00000451232 178 ntBASIC2.31□□□□□ -2.04
CDH11P55287 AC079354.2-201ENST00000453523 154 ntBASIC2.31□□□□□ -2.04
CDH11P55287 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.31□□□□□ -2.04
CDH11P55287 Y_RNA.670-201ENST00000516255 105 ntBASIC2.31□□□□□ -2.04
CDH11P55287 SCARNA3-201ENST00000517097 143 ntBASIC2.31□□□□□ -2.04
CDH11P55287 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH11P55287 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH11P55287 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH11P55287 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH11P55287 AL355375.2-201ENST00000574825 175 ntBASIC2.31□□□□□ -2.04
CDH11P55287 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.31□□□□□ -2.04
CDH11P55287 AC018889.1-201ENST00000605372 397 ntBASIC2.31□□□□□ -2.04
CDH11P55287 AP000654.2-201ENST00000605633 586 ntBASIC2.31□□□□□ -2.04
CDH11P55287 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH11P55287 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
CDH11P55287 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH11P55287 RNU6-486P-201ENST00000363116 107 ntBASIC2.3□□□□□ -2.04
CDH11P55287 Y_RNA.356-201ENST00000365475 113 ntBASIC2.3□□□□□ -2.04
CDH11P55287 Y_RNA.473-201ENST00000384333 102 ntBASIC2.3□□□□□ -2.04
CDH11P55287 SNORD116-29-201ENST00000384516 83 ntBASIC2.3□□□□□ -2.04
CDH11P55287 Y_RNA.594-201ENST00000410373 140 ntBASIC2.3□□□□□ -2.04
CDH11P55287 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH11P55287 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH11P55287 AC078809.1-201ENST00000427601 140 ntBASIC2.3□□□□□ -2.04
CDH11P55287 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH11P55287 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH11P55287 EEF1B2P7-201ENST00000451177 676 ntBASIC2.3□□□□□ -2.04
CDH11P55287 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH11P55287 Y_RNA.635-201ENST00000459041 101 ntBASIC2.3□□□□□ -2.04
CDH11P55287 AL121594.1-201ENST00000475906 575 ntBASIC2.3□□□□□ -2.04
CDH11P55287 RPL30P1-201ENST00000488676 339 ntBASIC2.3□□□□□ -2.04
CDH11P55287 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.3□□□□□ -2.04
CDH11P55287 AC114801.2-201ENST00000503825 781 ntBASIC2.3□□□□□ -2.04
CDH11P55287 SNORA25.11-201ENST00000515935 105 ntBASIC2.3□□□□□ -2.04
CDH11P55287 RNA5SP112-201ENST00000515937 99 ntBASIC2.3□□□□□ -2.04
CDH11P55287 RNA5SP282-201ENST00000516355 108 ntBASIC2.3□□□□□ -2.04
CDH11P55287 RNU1-54P-201ENST00000517181 120 ntBASIC2.3□□□□□ -2.04
CDH11P55287 APOOP3-201ENST00000536787 586 ntBASIC2.3□□□□□ -2.04
CDH11P55287 MIR5696-201ENST00000578474 85 ntBASIC2.3□□□□□ -2.04
CDH11P55287 AC103810.1-201ENST00000579873 453 ntBASIC2.3□□□□□ -2.04
CDH11P55287 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH11P55287 AC090616.3-201ENST00000582184 217 ntBASIC2.3□□□□□ -2.04
CDH11P55287 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
CDH11P55287 AC007792.1-201ENST00000623023 402 ntBASIC2.3□□□□□ -2.04
CDH11P55287 MIR7157-201ENST00000635801 60 ntBASIC2.3□□□□□ -2.04
CDH11P55287 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH11P55287 AP000560.1-201ENST00000624150 1937 ntBASIC2.3□□□□□ -2.04
CDH11P55287 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDH11P55287 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
CDH11P55287 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.29□□□□□ -2.04
CDH11P55287 RNU4-79P-201ENST00000362764 141 ntBASIC2.29□□□□□ -2.04
CDH11P55287 RNU6-1188P-201ENST00000363795 107 ntBASIC2.29□□□□□ -2.04
CDH11P55287 Y_RNA.387-201ENST00000383918 102 ntBASIC2.29□□□□□ -2.04
CDH11P55287 Y_RNA.404-201ENST00000383978 102 ntBASIC2.29□□□□□ -2.04
CDH11P55287 RNU6-790P-201ENST00000384479 105 ntBASIC2.29□□□□□ -2.04
CDH11P55287 AL356057.3-201ENST00000402607 340 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms