Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SNORA74D-201ENST00000516404 141 ntBASIC2.62□□□□□ -1.99
CENPAP49450 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.62□□□□□ -1.99
CENPAP49450 AC115990.1-201ENST00000526957 301 ntBASIC2.62□□□□□ -1.99
CENPAP49450 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.62□□□□□ -1.99
CENPAP49450 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.62□□□□□ -1.99
CENPAP49450 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.62□□□□□ -1.99
CENPAP49450 MYL12BP1-201ENST00000569826 507 ntBASIC2.62□□□□□ -1.99
CENPAP49450 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.62□□□□□ -1.99
CENPAP49450 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.62□□□□□ -1.99
CENPAP49450 AC080128.1-201ENST00000474389 1917 ntBASIC2.62□□□□□ -1.99
CENPAP49450 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CENPAP49450 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
CENPAP49450 AC233981.2-201ENST00000611524 1614 ntBASIC2.61□□□□□ -1.99
CENPAP49450 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CENPAP49450 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
CENPAP49450 SNORD50.1-201ENST00000362987 71 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RNU6-486P-201ENST00000363116 107 ntBASIC2.61□□□□□ -1.99
CENPAP49450 Y_RNA.187-201ENST00000363918 113 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RNU6-694P-201ENST00000364071 147 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RNU6-968P-201ENST00000384076 107 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RNU6-890P-201ENST00000384121 107 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RNU1-52P-201ENST00000384190 164 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RNU1-57P-201ENST00000384491 166 ntBASIC2.61□□□□□ -1.99
CENPAP49450 MIR512-1-201ENST00000384913 84 ntBASIC2.61□□□□□ -1.99
CENPAP49450 MIR186-201ENST00000384988 86 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AL590135.1-201ENST00000422215 156 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC019205.3-201ENST00000424573 156 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RPL23AP95-201ENST00000426806 265 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AL353997.1-201ENST00000432936 108 ntBASIC2.61□□□□□ -1.99
CENPAP49450 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.61□□□□□ -1.99
CENPAP49450 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.61□□□□□ -1.99
CENPAP49450 AC016700.2-201ENST00000446011 156 ntBASIC2.61□□□□□ -1.99
CENPAP49450 ELOCP24-201ENST00000456370 334 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC117440.1-201ENST00000474107 571 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC027575.1-201ENST00000481064 460 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC006445.1-201ENST00000491925 405 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC015911.1-201ENST00000495111 156 ntBASIC2.61□□□□□ -1.99
CENPAP49450 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.61□□□□□ -1.99
CENPAP49450 AC005741.1-201ENST00000511094 432 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC093303.1-201ENST00000514549 295 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC008885.1-201ENST00000514930 301 ntBASIC2.61□□□□□ -1.99
CENPAP49450 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
CENPAP49450 RNU6-264P-201ENST00000517134 104 ntBASIC2.61□□□□□ -1.99
CENPAP49450 SNORA70.24-201ENST00000517233 118 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC109329.1-201ENST00000518744 317 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.61□□□□□ -1.99
CENPAP49450 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.61□□□□□ -1.99
CENPAP49450 CBX3P8-201ENST00000532412 525 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.61□□□□□ -1.99
CENPAP49450 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.61□□□□□ -1.99
CENPAP49450 MIR5195-201ENST00000583555 115 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AC091953.5-201ENST00000622919 233 ntBASIC2.61□□□□□ -1.99
CENPAP49450 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CENPAP49450 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CENPAP49450 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.61□□□□□ -1.99
CENPAP49450 MTND5P10-201ENST00000603719 1809 ntBASIC2.61□□□□□ -1.99
CENPAP49450 AL355596.1-201ENST00000565399 3996 ntBASIC2.6□□□□□ -1.99
CENPAP49450 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
CENPAP49450 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CENPAP49450 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
CENPAP49450 RN7SKP61-201ENST00000410642 295 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AC096664.2-201ENST00000411843 406 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AC078809.1-201ENST00000427601 140 ntBASIC2.6□□□□□ -1.99
CENPAP49450 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.6□□□□□ -1.99
CENPAP49450 AL353705.4-201ENST00000449661 238 ntBASIC2.6□□□□□ -1.99
CENPAP49450 BX510359.1-201ENST00000456973 237 ntBASIC2.6□□□□□ -1.99
CENPAP49450 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.6□□□□□ -1.99
CENPAP49450 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.6□□□□□ -1.99
CENPAP49450 MRPS36P4-201ENST00000534436 298 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.6□□□□□ -1.99
CENPAP49450 MIR3199-1-201ENST00000582434 88 ntBASIC2.6□□□□□ -1.99
CENPAP49450 MIR3670-2-201ENST00000582974 65 ntBASIC2.6□□□□□ -1.99
CENPAP49450 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
CENPAP49450 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
CENPAP49450 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AL158827.2-201ENST00000602494 330 ntBASIC2.6□□□□□ -1.99
CENPAP49450 7SK.7-201ENST00000603504 247 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AC009318.2-201ENST00000610917 651 ntBASIC2.6□□□□□ -1.99
CENPAP49450 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.6□□□□□ -1.99
CENPAP49450 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.6□□□□□ -1.99
CENPAP49450 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CENPAP49450 AL691447.3-201ENST00000635020 330 ntBASIC2.6□□□□□ -1.99
CENPAP49450 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CENPAP49450 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.6□□□□□ -1.99
CENPAP49450 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.6□□□□□ -1.99
CENPAP49450 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.6□□□□□ -1.99
CENPAP49450 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CENPAP49450 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CENPAP49450 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
CENPAP49450 ZNF299P-201ENST00000406845 1804 ntBASIC2.59□□□□□ -1.99
CENPAP49450 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.59□□□□□ -1.99
CENPAP49450 AC092268.1-201ENST00000342691 405 ntBASIC2.59□□□□□ -1.99
CENPAP49450 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
CENPAP49450 RNU6-655P-201ENST00000362858 107 ntBASIC2.59□□□□□ -1.99
CENPAP49450 RNU6-1285P-201ENST00000363480 105 ntBASIC2.59□□□□□ -1.99
CENPAP49450 Y_RNA.813-201ENST00000364639 102 ntBASIC2.59□□□□□ -1.99
CENPAP49450 MIR181A2-201ENST00000384863 110 ntBASIC2.59□□□□□ -1.99
CENPAP49450 SNORA75.6-201ENST00000391318 127 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms