Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RNU6-842P-201ENST00000384269 107 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 RNU1-57P-201ENST00000384491 166 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 SNORD116-29-201ENST00000384516 83 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PTPN9P43378 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.69□□□□□ -1.98
PTPN9P43378 RPS20P15-201ENST00000412792 311 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AL513477.1-202ENST00000417061 214 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.69□□□□□ -1.98
PTPN9P43378 USMG5P1-201ENST00000425964 177 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.69□□□□□ -1.98
PTPN9P43378 AC236972.1-201ENST00000433225 199 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 ELOCP24-201ENST00000456370 334 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AP001486.1-201ENST00000463339 476 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AC016632.1-201ENST00000503994 196 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AC022447.4-201ENST00000504053 364 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.69□□□□□ -1.98
PTPN9P43378 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
PTPN9P43378 AC109446.1-201ENST00000566172 220 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 MIR4319-201ENST00000577285 85 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 MIR5696-201ENST00000578474 85 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.69□□□□□ -1.98
PTPN9P43378 AC073410.2-201ENST00000603240 332 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 AC009229.3-201ENST00000608056 282 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
PTPN9P43378 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PTPN9P43378 AC009541.1-201ENST00000438279 2662 ntBASIC2.69□□□□□ -1.98
PTPN9P43378 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PTPN9P43378 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PTPN9P43378 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PTPN9P43378 AC026241.1-201ENST00000517873 2142 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PTPN9P43378 OR56A5-201ENST00000340110 738 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 Y_RNA.259-201ENST00000364619 101 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 RNU6-142P-201ENST00000384019 107 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 Y_RNA.490-201ENST00000384413 102 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PTPN9P43378 AL133475.1-201ENST00000404414 305 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 RNA5SP184-201ENST00000411071 108 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 Z98742.2-201ENST00000431564 187 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.68□□□□□ -1.98
PTPN9P43378 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.68□□□□□ -1.98
PTPN9P43378 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.68□□□□□ -1.98
PTPN9P43378 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.68□□□□□ -1.98
PTPN9P43378 AC079354.2-201ENST00000453523 154 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 Y_RNA.653-201ENST00000459091 95 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 AL049873.1-201ENST00000480540 376 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 AC004486.1-201ENST00000546846 233 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 AC103810.1-201ENST00000579873 453 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 MIR3616-201ENST00000584070 92 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 AC009318.2-201ENST00000610917 651 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 AC126177.8-201ENST00000618339 1015 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 MTND4P29-201ENST00000503122 1372 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 Z75746.1-201ENST00000440243 2080 ntBASIC2.68□□□□□ -1.98
PTPN9P43378 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PTPN9P43378 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PTPN9P43378 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.67□□□□□ -1.98
PTPN9P43378 SNORD50.1-201ENST00000362987 71 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 RNU6-1210P-201ENST00000363775 107 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 Y_RNA.460-201ENST00000384255 102 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 SNORA41-201ENST00000384675 132 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 MIR186-201ENST00000384988 86 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PTPN9P43378 U6atac.2-201ENST00000408644 118 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.67□□□□□ -1.98
PTPN9P43378 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.67□□□□□ -1.98
PTPN9P43378 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.67□□□□□ -1.98
PTPN9P43378 AF228730.4-201ENST00000421457 183 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AIMP1P2-201ENST00000425294 312 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.67□□□□□ -1.98
PTPN9P43378 ARL5AP4-201ENST00000430731 512 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.67□□□□□ -1.98
PTPN9P43378 AC244670.1-201ENST00000436879 112 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 RPS15AP7-201ENST00000439294 405 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AC009296.1-201ENST00000443146 155 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AL513124.1-201ENST00000450410 614 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AC112771.1-201ENST00000463581 102 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 RPL30P12-201ENST00000474666 353 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 RPL30P1-201ENST00000488676 339 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AC104564.1-201ENST00000493028 407 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AC097473.1-201ENST00000508142 408 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.67□□□□□ -1.98
PTPN9P43378 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.67□□□□□ -1.98
PTPN9P43378 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.67□□□□□ -1.98
PTPN9P43378 AC021231.3-201ENST00000558497 370 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AC027176.1-201ENST00000560204 514 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 MIR5571-201ENST00000577998 113 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 MIR3136-201ENST00000583498 78 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AL133255.1-201ENST00000606374 441 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 AL359314.1-201ENST00000616913 261 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 SCARNA15.3-201ENST00000626315 122 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 SCARNA4.1-201ENST00000628597 123 ntBASIC2.67□□□□□ -1.98
PTPN9P43378 MTND5P9-201ENST00000503854 1755 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 AC073544.1-201ENST00000600110 1595 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 Y_RNA.123-201ENST00000363338 102 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 RNU6-1059P-201ENST00000363752 98 ntBASIC2.66□□□□□ -1.98
PTPN9P43378 RNU6-1286P-201ENST00000383871 107 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms