Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-320P-201ENST00000516511 106 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC022861.1-201ENST00000522981 663 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC242852.1-201ENST00000612151 96 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC244015.1-201ENST00000622301 99 ntBASIC-0.31□□□□□ -2.46
HTTP42858 AC138627.2-201ENST00000624202 601 ntBASIC-0.31□□□□□ -2.46
HTTP42858 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
HTTP42858 MIR888-201ENST00000401186 77 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC068533.2-201ENST00000411872 306 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.32□□□□□ -2.46
HTTP42858 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.32□□□□□ -2.46
HTTP42858 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.32□□□□□ -2.46
HTTP42858 AL441985.1-201ENST00000457727 251 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AP001324.2-201ENST00000461163 319 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-0.32□□□□□ -2.46
HTTP42858 AC114981.1-201ENST00000503897 678 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.32□□□□□ -2.46
HTTP42858 MTCO2P15-201ENST00000532655 656 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC023157.2-201ENST00000540596 141 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.32□□□□□ -2.46
HTTP42858 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.32□□□□□ -2.46
HTTP42858 AC131055.1-201ENST00000584626 316 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC004805.2-201ENST00000605382 482 ntBASIC-0.32□□□□□ -2.46
HTTP42858 RNU6-94P-201ENST00000607728 107 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AL355073.2-201ENST00000612106 557 ntBASIC-0.32□□□□□ -2.46
HTTP42858 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AL603839.4-201ENST00000624658 1005 ntBASIC-0.32□□□□□ -2.46
HTTP42858 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.32□□□□□ -2.46
HTTP42858 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.32□□□□□ -2.46
HTTP42858 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.32□□□□□ -2.46
HTTP42858 MIR1285-2-201ENST00000408311 88 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.32□□□□□ -2.46
HTTP42858 TIMM9P1-201ENST00000436122 256 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC004865.1-201ENST00000442276 1003 ntBASIC-0.32□□□□□ -2.46
HTTP42858 SMURF2P1-201ENST00000514992 481 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AP003066.2-201ENST00000529375 555 ntBASIC-0.32□□□□□ -2.46
HTTP42858 POLR2KP1-201ENST00000553226 168 ntBASIC-0.32□□□□□ -2.46
HTTP42858 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.32□□□□□ -2.46
HTTP42858 AL357094.1-201ENST00000603845 844 ntBASIC-0.32□□□□□ -2.46
HTTP42858 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
HTTP42858 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.33□□□□□ -2.46
HTTP42858 MTND5P2-201ENST00000442927 1142 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.33□□□□□ -2.46
HTTP42858 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.33□□□□□ -2.46
HTTP42858 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.33□□□□□ -2.46
HTTP42858 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 AL031176.1-201ENST00000604554 466 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.33□□□□□ -2.46
HTTP42858 AC021851.1-201ENST00000608537 1082 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC008759.3-201ENST00000613300 508 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AL109620.1-201ENST00000618738 1197 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AL590396.4-201ENST00000636779 956 ntBASIC-0.33□□□□□ -2.46
HTTP42858 SNORD14C-201ENST00000365382 88 ntBASIC-0.33□□□□□ -2.46
HTTP42858 SNORA8.2-201ENST00000384372 139 ntBASIC-0.33□□□□□ -2.46
HTTP42858 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 BX664727.1-201ENST00000416024 466 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 MTND2P4-201ENST00000445034 1004 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 ELOCP24-201ENST00000456370 334 ntBASIC-0.33□□□□□ -2.46
HTTP42858 RPL32P14-201ENST00000463196 378 ntBASIC-0.33□□□□□ -2.46
HTTP42858 RBBP4P6-201ENST00000508098 202 ntBASIC-0.33□□□□□ -2.46
HTTP42858 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.33□□□□□ -2.46
HTTP42858 RNU6-581P-201ENST00000516214 105 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.33□□□□□ -2.46
HTTP42858 AC112693.2-201ENST00000556538 232 ntBASIC-0.33□□□□□ -2.46
HTTP42858 MIR4709-201ENST00000577272 72 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AL022067.1-201ENST00000602426 454 ntBASIC-0.33□□□□□ -2.46
HTTP42858 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
HTTP42858 AC009269.6-201ENST00000621778 588 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC017037.3-201ENST00000625016 472 ntBASIC-0.33□□□□□ -2.46
HTTP42858 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
HTTP42858 MTND4P5-201ENST00000435821 1374 ntBASIC-0.33□□□□□ -2.46
HTTP42858 RNU6-657P-201ENST00000383904 107 ntBASIC-0.33□□□□□ -2.46
HTTP42858 SNORA75.3-201ENST00000391231 150 ntBASIC-0.33□□□□□ -2.46
HTTP42858 MTCO2P34-201ENST00000421994 607 ntBASIC-0.33□□□□□ -2.46
HTTP42858 snoU13.30-201ENST00000458951 104 ntBASIC-0.33□□□□□ -2.46
HTTP42858 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 AC093259.1-201ENST00000509755 300 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.33□□□□□ -2.46
HTTP42858 MIR4743-201ENST00000584576 69 ntBASIC-0.33□□□□□ -2.46
HTTP42858 AC011921.3-201ENST00000605540 361 ntBASIC-0.33□□□□□ -2.46
HTTP42858 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.33□□□□□ -2.46
HTTP42858 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.34□□□□□ -2.46
HTTP42858 RNA5SP493-201ENST00000364115 91 ntBASIC-0.34□□□□□ -2.46
HTTP42858 SNORD105-201ENST00000386910 85 ntBASIC-0.34□□□□□ -2.46
HTTP42858 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
HTTP42858 USP9YP19-201ENST00000412165 485 ntBASIC-0.34□□□□□ -2.46
HTTP42858 USP9YP13-201ENST00000417797 480 ntBASIC-0.34□□□□□ -2.46
HTTP42858 FAM204CP-201ENST00000424489 642 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AC002429.1-201ENST00000437672 148 ntBASIC-0.34□□□□□ -2.46
HTTP42858 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.34□□□□□ -2.46
HTTP42858 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.34□□□□□ -2.46
HTTP42858 AC022364.2-201ENST00000457963 554 ntBASIC-0.34□□□□□ -2.46
HTTP42858 RPS29P15-201ENST00000458329 171 ntBASIC-0.34□□□□□ -2.46
HTTP42858 RNU7-56P-201ENST00000458744 62 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms