Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Y_RNA.150-201ENST00000363562 102 ntBASIC3.73□□□□□ -1.81
CCNFP41002 SNORD115-8-201ENST00000363856 82 ntBASIC3.73□□□□□ -1.81
CCNFP41002 SNORA14A-201ENST00000364773 135 ntBASIC3.73□□□□□ -1.81
CCNFP41002 SNORA72.2-201ENST00000365028 127 ntBASIC3.73□□□□□ -1.81
CCNFP41002 SNORD115-38-201ENST00000365037 82 ntBASIC3.73□□□□□ -1.81
CCNFP41002 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
CCNFP41002 RNU6-514P-201ENST00000384208 107 ntBASIC3.73□□□□□ -1.81
CCNFP41002 Y_RNA.785-201ENST00000384290 109 ntBASIC3.73□□□□□ -1.81
CCNFP41002 RNU6-750P-201ENST00000390946 107 ntBASIC3.73□□□□□ -1.81
CCNFP41002 AL365496.1-201ENST00000426885 215 ntBASIC3.73□□□□□ -1.81
CCNFP41002 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.73□□□□□ -1.81
CCNFP41002 AC112220.1-201ENST00000434628 355 ntBASIC3.73□□□□□ -1.81
CCNFP41002 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.73□□□□□ -1.81
CCNFP41002 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.73□□□□□ -1.81
CCNFP41002 AIG1P1-201ENST00000503376 148 ntBASIC3.73□□□□□ -1.81
CCNFP41002 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.73□□□□□ -1.81
CCNFP41002 AK6P2-201ENST00000549020 471 ntBASIC3.73□□□□□ -1.81
CCNFP41002 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
CCNFP41002 AC005176.2-201ENST00000596933 147 ntBASIC3.73□□□□□ -1.81
CCNFP41002 AC004792.1-201ENST00000614523 137 ntBASIC3.73□□□□□ -1.81
CCNFP41002 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCNFP41002 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.73□□□□□ -1.81
CCNFP41002 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCNFP41002 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCNFP41002 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCNFP41002 AC058791.1-201ENST00000608412 3198 ntBASIC3.73□□□□□ -1.81
CCNFP41002 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
CCNFP41002 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CCNFP41002 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 AC010889.1-201ENST00000566193 2666 ntBASIC3.72□□□□□ -1.81
CCNFP41002 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCNFP41002 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCNFP41002 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCNFP41002 Y_RNA.83-201ENST00000363005 113 ntBASIC3.72□□□□□ -1.81
CCNFP41002 Y_RNA.179-201ENST00000363844 90 ntBASIC3.72□□□□□ -1.81
CCNFP41002 Y_RNA.270-201ENST00000364693 104 ntBASIC3.72□□□□□ -1.81
CCNFP41002 Y_RNA.331-201ENST00000365267 102 ntBASIC3.72□□□□□ -1.81
CCNFP41002 RNU6-326P-201ENST00000365480 107 ntBASIC3.72□□□□□ -1.81
CCNFP41002 AL359837.1-201ENST00000381357 287 ntBASIC3.72□□□□□ -1.81
CCNFP41002 RNU6-1062P-201ENST00000383908 107 ntBASIC3.72□□□□□ -1.81
CCNFP41002 SNORA26.3-201ENST00000391119 136 ntBASIC3.72□□□□□ -1.81
CCNFP41002 PTMAP5-201ENST00000393073 333 ntBASIC3.72□□□□□ -1.81
CCNFP41002 SNORA57.3-201ENST00000411095 141 ntBASIC3.72□□□□□ -1.81
CCNFP41002 Y_RNA.793-201ENST00000411222 111 ntBASIC3.72□□□□□ -1.81
CCNFP41002 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.72□□□□□ -1.81
CCNFP41002 UQCRBP2-201ENST00000447827 297 ntBASIC3.72□□□□□ -1.81
CCNFP41002 AL138752.1-201ENST00000452964 351 ntBASIC3.72□□□□□ -1.81
CCNFP41002 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.72□□□□□ -1.81
CCNFP41002 Y_RNA.683-201ENST00000516508 93 ntBASIC3.72□□□□□ -1.81
CCNFP41002 Y_RNA.700-201ENST00000516806 100 ntBASIC3.72□□□□□ -1.81
CCNFP41002 SNORD59.2-201ENST00000516873 68 ntBASIC3.72□□□□□ -1.81
CCNFP41002 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.72□□□□□ -1.81
CCNFP41002 RPS15AP11-201ENST00000594193 385 ntBASIC3.72□□□□□ -1.81
CCNFP41002 AC008749.1-201ENST00000597650 306 ntBASIC3.72□□□□□ -1.81
CCNFP41002 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 MZT1P2-201ENST00000604387 248 ntBASIC3.72□□□□□ -1.81
CCNFP41002 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCNFP41002 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.72□□□□□ -1.81
CCNFP41002 MFSD8-236ENST00000641509 4050 ntBASIC3.72□□□□□ -1.81
CCNFP41002 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CCNFP41002 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCNFP41002 MTND5P35-201ENST00000557537 1720 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RNU1-105P-201ENST00000363470 161 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RNU6-727P-201ENST00000363592 107 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RNU5F-3P-201ENST00000363767 117 ntBASIC3.71□□□□□ -1.82
CCNFP41002 Y_RNA.199-201ENST00000364014 102 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RNY1-201ENST00000364228 113 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RNU6-748P-201ENST00000384648 107 ntBASIC3.71□□□□□ -1.82
CCNFP41002 Y_RNA.570-201ENST00000384750 101 ntBASIC3.71□□□□□ -1.82
CCNFP41002 MIR591-201ENST00000385290 95 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RNA5SP424-201ENST00000390988 115 ntBASIC3.71□□□□□ -1.82
CCNFP41002 U3.26-201ENST00000391236 204 ntBASIC3.71□□□□□ -1.82
CCNFP41002 AC006989.1-201ENST00000427212 131 ntBASIC3.71□□□□□ -1.82
CCNFP41002 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.71□□□□□ -1.82
CCNFP41002 AL049830.2-201ENST00000480072 201 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RNU5F-2P-201ENST00000516066 82 ntBASIC3.71□□□□□ -1.82
CCNFP41002 CYP4A27P-201ENST00000567218 190 ntBASIC3.71□□□□□ -1.82
CCNFP41002 RN7SL703P-201ENST00000578485 302 ntBASIC3.71□□□□□ -1.82
CCNFP41002 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.71□□□□□ -1.82
CCNFP41002 AC073073.2-201ENST00000609827 2578 ntBASIC3.71□□□□□ -1.82
CCNFP41002 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCNFP41002 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCNFP41002 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCNFP41002 RNU6-529P-201ENST00000363383 104 ntBASIC3.7□□□□□ -1.82
CCNFP41002 RNA5SP42-201ENST00000364278 115 ntBASIC3.7□□□□□ -1.82
CCNFP41002 RNU6-740P-201ENST00000364734 105 ntBASIC3.7□□□□□ -1.82
CCNFP41002 Y_RNA.498-201ENST00000384460 102 ntBASIC3.7□□□□□ -1.82
CCNFP41002 SNORD58.1-201ENST00000391313 66 ntBASIC3.7□□□□□ -1.82
CCNFP41002 AL139156.1-201ENST00000412785 841 ntBASIC3.7□□□□□ -1.82
CCNFP41002 AL390729.2-201ENST00000416137 156 ntBASIC3.7□□□□□ -1.82
CCNFP41002 POLR2KP2-201ENST00000438155 177 ntBASIC3.7□□□□□ -1.82
CCNFP41002 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNFP41002 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.7□□□□□ -1.82
CCNFP41002 Y_RNA.679-201ENST00000516416 91 ntBASIC3.7□□□□□ -1.82
CCNFP41002 NDUFB9P3-201ENST00000521269 501 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms