Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 BTF3P15-201ENST00000455606 336 ntBASIC2.91□□□□□ -1.94
CIITAP33076 AC008571.1-201ENST00000467232 300 ntBASIC2.91□□□□□ -1.94
CIITAP33076 AL163540.1-201ENST00000485382 386 ntBASIC2.91□□□□□ -1.94
CIITAP33076 SMURF2P1-201ENST00000514992 481 ntBASIC2.91□□□□□ -1.94
CIITAP33076 RNU6-377P-201ENST00000515965 102 ntBASIC2.91□□□□□ -1.94
CIITAP33076 RNU6-581P-201ENST00000516214 105 ntBASIC2.91□□□□□ -1.94
CIITAP33076 SNORA31.18-201ENST00000517043 134 ntBASIC2.91□□□□□ -1.94
CIITAP33076 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.91□□□□□ -1.94
CIITAP33076 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.91□□□□□ -1.94
CIITAP33076 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CIITAP33076 AC023043.3-201ENST00000593113 385 ntBASIC2.91□□□□□ -1.94
CIITAP33076 RPL23AP88-201ENST00000605759 454 ntBASIC2.91□□□□□ -1.94
CIITAP33076 MIR6817-201ENST00000615588 66 ntBASIC2.91□□□□□ -1.94
CIITAP33076 AL161431.1-201ENST00000618966 4205 ntBASIC2.91□□□□□ -1.94
CIITAP33076 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CIITAP33076 ADAM3A-203ENST00000461344 2157 ntBASIC2.91□□□□□ -1.94
CIITAP33076 AC010329.5-201ENST00000623497 2174 ntBASIC2.91□□□□□ -1.94
CIITAP33076 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CIITAP33076 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.91□□□□□ -1.94
CIITAP33076 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CIITAP33076 Y_RNA.2-201ENST00000362330 96 ntBASIC2.9□□□□□ -1.95
CIITAP33076 RNU6-1083P-201ENST00000384022 107 ntBASIC2.9□□□□□ -1.95
CIITAP33076 RNU6-790P-201ENST00000384479 105 ntBASIC2.9□□□□□ -1.95
CIITAP33076 snosnR66.1-201ENST00000391095 99 ntBASIC2.9□□□□□ -1.95
CIITAP33076 FTH1P15-201ENST00000406984 280 ntBASIC2.9□□□□□ -1.95
CIITAP33076 RNU2-49P-201ENST00000410666 184 ntBASIC2.9□□□□□ -1.95
CIITAP33076 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
CIITAP33076 GSTA11P-201ENST00000452866 669 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AC090096.1-201ENST00000489168 390 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.9□□□□□ -1.95
CIITAP33076 AK3P2-201ENST00000507976 429 ntBASIC2.9□□□□□ -1.95
CIITAP33076 MRPS36P2-201ENST00000512569 299 ntBASIC2.9□□□□□ -1.95
CIITAP33076 RNU6-470P-201ENST00000515954 104 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AP004607.1-201ENST00000524456 203 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AC109446.1-201ENST00000566172 220 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AC005034.5-201ENST00000604219 466 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AC116312.1-201ENST00000606841 314 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AL359198.2-201ENST00000611836 194 ntBASIC2.9□□□□□ -1.95
CIITAP33076 AC091925.1-201ENST00000623204 462 ntBASIC2.9□□□□□ -1.95
CIITAP33076 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
CIITAP33076 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CIITAP33076 AC010889.1-201ENST00000566193 2666 ntBASIC2.89□□□□□ -1.95
CIITAP33076 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.89□□□□□ -1.95
CIITAP33076 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CIITAP33076 Y_RNA.48-201ENST00000362710 103 ntBASIC2.89□□□□□ -1.95
CIITAP33076 RNU1-109P-201ENST00000383960 147 ntBASIC2.89□□□□□ -1.95
CIITAP33076 SNORA41-201ENST00000384675 132 ntBASIC2.89□□□□□ -1.95
CIITAP33076 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CIITAP33076 RN7SKP284-201ENST00000411002 343 ntBASIC2.89□□□□□ -1.95
CIITAP33076 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.89□□□□□ -1.95
CIITAP33076 RPS15AP10-201ENST00000432472 382 ntBASIC2.89□□□□□ -1.95
CIITAP33076 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.89□□□□□ -1.95
CIITAP33076 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CIITAP33076 FO393415.2-201ENST00000480085 343 ntBASIC2.89□□□□□ -1.95
CIITAP33076 AC022447.4-201ENST00000504053 364 ntBASIC2.89□□□□□ -1.95
CIITAP33076 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.89□□□□□ -1.95
CIITAP33076 RNA5SP320-201ENST00000516263 124 ntBASIC2.89□□□□□ -1.95
CIITAP33076 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.89□□□□□ -1.95
CIITAP33076 RNA5SP148-201ENST00000516527 94 ntBASIC2.89□□□□□ -1.95
CIITAP33076 RNU6-699P-201ENST00000517081 110 ntBASIC2.89□□□□□ -1.95
CIITAP33076 AL158827.2-201ENST00000602494 330 ntBASIC2.89□□□□□ -1.95
CIITAP33076 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.89□□□□□ -1.95
CIITAP33076 AL691447.3-201ENST00000635020 330 ntBASIC2.89□□□□□ -1.95
CIITAP33076 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CIITAP33076 AL136360.1-201ENST00000503377 1900 ntBASIC2.89□□□□□ -1.95
CIITAP33076 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CIITAP33076 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.88□□□□□ -1.95
CIITAP33076 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CIITAP33076 MTND4P27-201ENST00000450813 1354 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC007336.1-201ENST00000576365 3828 ntBASIC2.88□□□□□ -1.95
CIITAP33076 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
CIITAP33076 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.88□□□□□ -1.95
CIITAP33076 Y_RNA.28-201ENST00000362554 111 ntBASIC2.88□□□□□ -1.95
CIITAP33076 SNORD50.1-201ENST00000362987 71 ntBASIC2.88□□□□□ -1.95
CIITAP33076 RNU6-1180P-201ENST00000364935 107 ntBASIC2.88□□□□□ -1.95
CIITAP33076 SNORA33.2-201ENST00000365413 134 ntBASIC2.88□□□□□ -1.95
CIITAP33076 MIR518C-201ENST00000384822 101 ntBASIC2.88□□□□□ -1.95
CIITAP33076 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.88□□□□□ -1.95
CIITAP33076 RPS27AP9-201ENST00000477681 438 ntBASIC2.88□□□□□ -1.95
CIITAP33076 MRPL42P6-201ENST00000486397 371 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC022493.2-201ENST00000506122 481 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC116655.1-201ENST00000508324 901 ntBASIC2.88□□□□□ -1.95
CIITAP33076 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.88□□□□□ -1.95
CIITAP33076 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.88□□□□□ -1.95
CIITAP33076 RNU6-976P-201ENST00000516086 111 ntBASIC2.88□□□□□ -1.95
CIITAP33076 RNU6-612P-201ENST00000516909 102 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AP005902.1-201ENST00000521358 186 ntBASIC2.88□□□□□ -1.95
CIITAP33076 COX6CP5-201ENST00000527162 228 ntBASIC2.88□□□□□ -1.95
CIITAP33076 CBX3P8-201ENST00000532412 525 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC006199.1-201ENST00000548728 219 ntBASIC2.88□□□□□ -1.95
CIITAP33076 CR383656.8-201ENST00000549046 145 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC103810.1-201ENST00000579873 453 ntBASIC2.88□□□□□ -1.95
CIITAP33076 VN1R107P-201ENST00000601784 209 ntBASIC2.88□□□□□ -1.95
CIITAP33076 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.88□□□□□ -1.95
CIITAP33076 AC078795.3-201ENST00000602913 472 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC005014.2-201ENST00000607795 599 ntBASIC2.88□□□□□ -1.95
CIITAP33076 MIR8076-201ENST00000611401 83 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AC133104.2-201ENST00000615272 193 ntBASIC2.88□□□□□ -1.95
CIITAP33076 AL449363.1-201ENST00000617815 186 ntBASIC2.88□□□□□ -1.95
CIITAP33076 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms