Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC009646.1-201ENST00000510455 318 ntBASIC-0.25□□□□□ -2.45
CLIP1P30622 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.25□□□□□ -2.45
CLIP1P30622 MIR4709-201ENST00000577272 72 ntBASIC-0.25□□□□□ -2.45
CLIP1P30622 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.25□□□□□ -2.45
CLIP1P30622 AL357312.1-201ENST00000603879 298 ntBASIC-0.25□□□□□ -2.45
CLIP1P30622 uc_338.6-201ENST00000613544 171 ntBASIC-0.25□□□□□ -2.45
CLIP1P30622 AL031667.3-201ENST00000620124 655 ntBASIC-0.25□□□□□ -2.45
CLIP1P30622 CASC19-280ENST00000642102 1351 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 SNORA42.1-201ENST00000363515 137 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 RNU6-877P-201ENST00000383868 107 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 MTCO3P1-205ENST00000422088 832 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.26□□□□□ -2.45
CLIP1P30622 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 MTND1P30-201ENST00000441241 901 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 RPS29P8-201ENST00000445109 171 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.26□□□□□ -2.45
CLIP1P30622 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.26□□□□□ -2.45
CLIP1P30622 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC-0.26□□□□□ -2.45
CLIP1P30622 U7.7-201ENST00000459276 60 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 AC069113.3-201ENST00000521019 150 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.26□□□□□ -2.45
CLIP1P30622 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CLIP1P30622 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.26□□□□□ -2.45
CLIP1P30622 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CLIP1P30622 MIR520F-201ENST00000384824 87 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 MIR29B2-201ENST00000385055 81 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CLIP1P30622 CBX3P9-201ENST00000402326 552 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 AC073261.1-201ENST00000429409 121 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 HMGN2P34-201ENST00000437647 269 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 USP9YP22-201ENST00000438971 294 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.27□□□□□ -2.45
CLIP1P30622 RNU6-333P-201ENST00000459117 107 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 RNU6-927P-201ENST00000516199 100 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 RNU6-947P-201ENST00000516264 106 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.27□□□□□ -2.45
CLIP1P30622 AL353778.1-201ENST00000603149 408 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 AC080078.2-201ENST00000603766 501 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 AL358072.1-201ENST00000604156 575 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 AC011451.2-201ENST00000604303 598 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CLIP1P30622 AC084824.4-201ENST00000620106 731 ntBASIC-0.27□□□□□ -2.45
CLIP1P30622 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 SNORD116-13-201ENST00000384408 92 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.28□□□□□ -2.45
CLIP1P30622 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.28□□□□□ -2.45
CLIP1P30622 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.28□□□□□ -2.45
CLIP1P30622 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.28□□□□□ -2.45
CLIP1P30622 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.28□□□□□ -2.45
CLIP1P30622 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.28□□□□□ -2.45
CLIP1P30622 RNU7-34P-201ENST00000459394 64 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 MTND5P13-201ENST00000513046 1079 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 SNORD60.2-201ENST00000516883 86 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 AC090502.2-201ENST00000549267 280 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 VN1R83P-201ENST00000595685 445 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 AC104408.1-201ENST00000605241 170 ntBASIC-0.28□□□□□ -2.45
CLIP1P30622 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.28□□□□□ -2.45
CLIP1P30622 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.28□□□□□ -2.45
CLIP1P30622 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 RNU6-188P-201ENST00000364207 107 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 AL357139.1-201ENST00000407792 426 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.29□□□□□ -2.46
CLIP1P30622 BX664727.1-201ENST00000416024 466 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 C1DP2-201ENST00000418167 426 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.29□□□□□ -2.46
CLIP1P30622 C1DP4-201ENST00000455429 424 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.29□□□□□ -2.46
CLIP1P30622 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.29□□□□□ -2.46
CLIP1P30622 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.29□□□□□ -2.46
CLIP1P30622 AC022523.2-201ENST00000561045 150 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.29□□□□□ -2.46
CLIP1P30622 AC022022.2-201ENST00000602989 360 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 AL353149.1-201ENST00000610667 244 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.29□□□□□ -2.46
CLIP1P30622 AL163051.2-201ENST00000618976 735 ntBASIC-0.29□□□□□ -2.46
CLIP1P30622 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.29□□□□□ -2.46
CLIP1P30622 RNU6-512P-201ENST00000364438 103 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 MIR525-201ENST00000384978 85 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 RNA5SP496-201ENST00000391240 109 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.3□□□□□ -2.46
CLIP1P30622 ISCA1P1-201ENST00000426679 387 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.3□□□□□ -2.46
CLIP1P30622 MTCO3P29-201ENST00000432119 779 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 MTATP6P30-201ENST00000443540 664 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.3□□□□□ -2.46
CLIP1P30622 AL050341.1-201ENST00000447743 313 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 RNU6-863P-201ENST00000515989 104 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.3□□□□□ -2.46
CLIP1P30622 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.3□□□□□ -2.46
CLIP1P30622 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.3□□□□□ -2.46
CLIP1P30622 AC136618.2-201ENST00000575091 400 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.3□□□□□ -2.46
CLIP1P30622 AC242628.1-201ENST00000606810 391 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 U6.101-201ENST00000637707 76 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.3□□□□□ -2.46
CLIP1P30622 RNU6-637P-201ENST00000384050 107 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 RNU6-952P-201ENST00000391164 108 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms