Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR493-201ENST00000385254 89 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 RNU6-550P-201ENST00000391057 101 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 OR9R1P-201ENST00000412200 877 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A1P20908 RPL27AP8-201ENST00000424277 446 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AC093106.2-201ENST00000428212 385 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 MTND4P25-201ENST00000441039 533 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.42□□□□□ -2.18
COL5A1P20908 RNU6-1208P-201ENST00000459588 107 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 RNU6-329P-201ENST00000459618 107 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.42□□□□□ -2.18
COL5A1P20908 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A1P20908 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A1P20908 MIR514B-201ENST00000516774 80 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 RN7SKP256-201ENST00000517201 314 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 CASP1P1-201ENST00000526345 212 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 CYCSP27-201ENST00000527643 293 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A1P20908 AC093012.1-202ENST00000549403 582 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A1P20908 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.42□□□□□ -2.18
COL5A1P20908 AC009127.3-201ENST00000570531 403 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 MIR5692A1-201ENST00000580523 69 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AC090897.2-201ENST00000581715 130 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 MIR3672-201ENST00000584290 82 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AC092807.2-201ENST00000609367 243 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 AP003400.5-201ENST00000624827 617 ntBASIC1.42□□□□□ -2.18
COL5A1P20908 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A1P20908 CBX3P1-201ENST00000325243 554 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COL5A1P20908 Y_RNA.100-201ENST00000363141 102 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 RNU6-371P-201ENST00000364283 108 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 Y_RNA.279-201ENST00000364763 95 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 Y_RNA.303-201ENST00000364998 94 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 SNORA1.3-201ENST00000384676 136 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 MIR17-201ENST00000385012 84 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.41□□□□□ -2.18
COL5A1P20908 AL160275.3-201ENST00000423876 471 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AL627311.1-201ENST00000431514 115 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AL606489.2-201ENST00000433886 234 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC093019.1-201ENST00000443135 252 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A1P20908 RPL30P14-201ENST00000482744 348 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC008628.2-201ENST00000502605 298 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A1P20908 RNU6-189P-201ENST00000516120 101 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 RNU6-566P-201ENST00000516790 107 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 RNU6-1088P-201ENST00000516850 104 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC022634.1-201ENST00000520765 532 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AP004607.1-201ENST00000524456 203 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL5A1P20908 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.41□□□□□ -2.18
COL5A1P20908 AC090115.3-201ENST00000553218 849 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.41□□□□□ -2.18
COL5A1P20908 MIR3941-201ENST00000582572 103 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 FGF7P1-201ENST00000582820 288 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC018638.8-201ENST00000588755 281 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC011712.1-201ENST00000588959 234 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC002545.1-201ENST00000592511 181 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC243960.4-201ENST00000600532 288 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AC106900.2-201ENST00000604994 317 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 AL132765.2-201ENST00000610812 351 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 U2.17-201ENST00000611454 95 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 DUSP12P1-201ENST00000612874 516 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 U2.21-201ENST00000637295 81 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL5A1P20908 MTND4P29-201ENST00000503122 1372 ntBASIC1.41□□□□□ -2.18
COL5A1P20908 RNU1-22P-201ENST00000363334 158 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 SNORA4.3-201ENST00000365564 137 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 NDUFS5P1-201ENST00000405668 289 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 RPL21P90-201ENST00000415692 466 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.4□□□□□ -2.18
COL5A1P20908 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.4□□□□□ -2.18
COL5A1P20908 TMEM167AP1-201ENST00000423409 219 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.4□□□□□ -2.18
COL5A1P20908 MTND3P23-201ENST00000431980 347 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.4□□□□□ -2.18
COL5A1P20908 AC087588.1-201ENST00000462203 316 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.4□□□□□ -2.18
COL5A1P20908 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.4□□□□□ -2.18
COL5A1P20908 AC025465.4-201ENST00000513422 638 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 SNORA19.2-201ENST00000516013 114 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 RNU6-507P-201ENST00000516045 100 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 SNORA14.1-201ENST00000516113 141 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 RNU6-677P-201ENST00000516914 101 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 RNU6-143P-201ENST00000516942 93 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 RNU6-685P-201ENST00000517088 95 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.4□□□□□ -2.18
COL5A1P20908 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.4□□□□□ -2.18
COL5A1P20908 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.4□□□□□ -2.18
COL5A1P20908 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.4□□□□□ -2.18
COL5A1P20908 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 MIR4424-201ENST00000585257 86 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 NUTF2P8-201ENST00000604593 363 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 AC113139.1-201ENST00000605049 239 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 AC090132.2-201ENST00000615881 347 ntBASIC1.4□□□□□ -2.18
COL5A1P20908 AC009248.2-201ENST00000619826 254 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms