Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR578-201ENST00000384828 96 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AL031779.1-201ENST00000415663 330 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 MTND1P32-201ENST00000433043 938 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC245047.7-201ENST00000440265 293 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 MTND5P2-201ENST00000442927 1142 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.37□□□□□ -2.35
CXCL1P09341 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.37□□□□□ -2.35
CXCL1P09341 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.37□□□□□ -2.35
CXCL1P09341 AC098869.1-201ENST00000481627 292 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 HMGN1P7-201ENST00000491722 313 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 RNU6-1041P-201ENST00000516254 102 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 RNU4-54P-201ENST00000516428 129 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 LRRC6P1-201ENST00000532188 885 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.37□□□□□ -2.35
CXCL1P09341 AC133485.1-201ENST00000567176 124 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC138907.6-201ENST00000568401 126 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 MIR544B-201ENST00000582372 78 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC068620.3-201ENST00000602749 560 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AL513534.2-201ENST00000603836 250 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 CTHRC1P1-201ENST00000605383 469 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AL353765.1-201ENST00000605514 183 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC092106.3-201ENST00000611308 722 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC021506.2-201ENST00000612354 169 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.37□□□□□ -2.35
CXCL1P09341 MIR6767-201ENST00000637302 66 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 AC018630.2-201ENST00000534866 2403 ntBASIC0.37□□□□□ -2.35
CXCL1P09341 MTND4P14-201ENST00000435799 1354 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 RNU5E-7P-201ENST00000365290 117 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 RNU6-298P-201ENST00000390888 96 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC019070.1-201ENST00000415008 1024 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.36□□□□□ -2.35
CXCL1P09341 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.36□□□□□ -2.35
CXCL1P09341 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.36□□□□□ -2.35
CXCL1P09341 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.36□□□□□ -2.35
CXCL1P09341 AL117351.1-201ENST00000438864 766 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 MTND1P18-201ENST00000448191 573 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.36□□□□□ -2.35
CXCL1P09341 MTCYBP1-201ENST00000454315 1119 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC007547.1-201ENST00000462177 490 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC048334.1-201ENST00000477975 159 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 DEFB108E-201ENST00000524692 240 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AP003049.1-201ENST00000529418 457 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.36□□□□□ -2.35
CXCL1P09341 AC092451.2-201ENST00000538746 658 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.36□□□□□ -2.35
CXCL1P09341 AC090888.2-201ENST00000559765 1144 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC109446.1-201ENST00000566172 220 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC110760.3-201ENST00000598794 467 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC068790.6-201ENST00000602558 258 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC012507.3-201ENST00000603556 477 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC091965.4-201ENST00000607691 587 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AL354696.1-201ENST00000614652 497 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC126177.8-201ENST00000618339 1015 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 AC106858.1-201ENST00000637497 429 ntBASIC0.36□□□□□ -2.35
CXCL1P09341 RNU1-76P-201ENST00000362903 159 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 RNU6-969P-201ENST00000383900 105 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AF228730.1-201ENST00000397972 663 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 RPL23AP95-201ENST00000426806 265 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.35□□□□□ -2.35
CXCL1P09341 AL360271.2-201ENST00000447710 161 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.35□□□□□ -2.35
CXCL1P09341 RNU7-34P-201ENST00000459394 64 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC034244.1-201ENST00000507687 207 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC067942.3-201ENST00000512025 362 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC011406.1-201ENST00000512440 370 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 RNU6-1098P-201ENST00000516772 96 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 MTND2P7-201ENST00000521337 640 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC011604.1-201ENST00000545978 196 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC008015.1-201ENST00000555505 465 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC109446.2-201ENST00000567872 497 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.35□□□□□ -2.35
CXCL1P09341 U4.7-201ENST00000638126 106 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 AC009541.1-201ENST00000438279 2662 ntBASIC0.35□□□□□ -2.35
CXCL1P09341 RNU6-1141P-201ENST00000364520 107 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 RNU6-17P-201ENST00000384245 107 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 SNORA80D-201ENST00000384488 135 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 RNU6-18P-201ENST00000384527 107 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 RNU6-950P-201ENST00000384651 107 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 MIR942-201ENST00000401111 86 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 HIGD1AP15-201ENST00000416198 280 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 RPL22P18-201ENST00000417197 377 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AC060773.1-201ENST00000421698 310 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AC006366.1-201ENST00000422002 759 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.34□□□□□ -2.36
CXCL1P09341 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.34□□□□□ -2.36
CXCL1P09341 AC007327.1-201ENST00000447461 264 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 RNU7-14P-201ENST00000459331 62 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AL049829.1-201ENST00000465411 156 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.34□□□□□ -2.36
CXCL1P09341 AC091435.1-201ENST00000505442 584 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
CXCL1P09341 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.34□□□□□ -2.36
CXCL1P09341 RNU1-86P-201ENST00000516108 154 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms