Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC100810.6-201ENST00000638068 285 ntBASIC2.51□□□□□ -2.01
RB1P06400 MTND4P5-201ENST00000435821 1374 ntBASIC2.5□□□□□ -2.01
RB1P06400 MTND4P23-201ENST00000447723 1363 ntBASIC2.5□□□□□ -2.01
RB1P06400 RNU6-1252P-201ENST00000363054 104 ntBASIC2.5□□□□□ -2.01
RB1P06400 SNORD32A-201ENST00000364805 84 ntBASIC2.5□□□□□ -2.01
RB1P06400 Y_RNA.414-201ENST00000384011 101 ntBASIC2.5□□□□□ -2.01
RB1P06400 RNU6-1032P-201ENST00000384100 107 ntBASIC2.5□□□□□ -2.01
RB1P06400 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
RB1P06400 MIR95-201ENST00000385072 81 ntBASIC2.5□□□□□ -2.01
RB1P06400 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.5□□□□□ -2.01
RB1P06400 ZNF885P-201ENST00000420174 1098 ntBASIC2.5□□□□□ -2.01
RB1P06400 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.5□□□□□ -2.01
RB1P06400 RPL23AP42-201ENST00000471152 471 ntBASIC2.5□□□□□ -2.01
RB1P06400 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.5□□□□□ -2.01
RB1P06400 AC092436.3-201ENST00000511788 257 ntBASIC2.5□□□□□ -2.01
RB1P06400 RPL39P5-202ENST00000512505 151 ntBASIC2.5□□□□□ -2.01
RB1P06400 RNU6-1314P-201ENST00000517139 104 ntBASIC2.5□□□□□ -2.01
RB1P06400 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.5□□□□□ -2.01
RB1P06400 AC060766.3-201ENST00000591442 263 ntBASIC2.5□□□□□ -2.01
RB1P06400 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RB1P06400 AC104237.2-201ENST00000612456 443 ntBASIC2.5□□□□□ -2.01
RB1P06400 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
RB1P06400 AL353997.5-201ENST00000618886 171 ntBASIC2.5□□□□□ -2.01
RB1P06400 AC006504.8-201ENST00000621046 635 ntBASIC2.5□□□□□ -2.01
RB1P06400 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.5□□□□□ -2.01
RB1P06400 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.5□□□□□ -2.01
RB1P06400 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
RB1P06400 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RB1P06400 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.49□□□□□ -2.01
RB1P06400 AC069528.2-201ENST00000624849 1991 ntBASIC2.49□□□□□ -2.01
RB1P06400 AL162578.1-201ENST00000406202 378 ntBASIC2.49□□□□□ -2.01
RB1P06400 AP000275.1-201ENST00000411943 390 ntBASIC2.49□□□□□ -2.01
RB1P06400 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.49□□□□□ -2.01
RB1P06400 VN1R36P-201ENST00000414936 291 ntBASIC2.49□□□□□ -2.01
RB1P06400 AL513185.2-201ENST00000425543 193 ntBASIC2.49□□□□□ -2.01
RB1P06400 RPL23AP95-201ENST00000426806 265 ntBASIC2.49□□□□□ -2.01
RB1P06400 MTATP6P13-201ENST00000438531 667 ntBASIC2.49□□□□□ -2.01
RB1P06400 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.49□□□□□ -2.01
RB1P06400 AL031659.1-201ENST00000447075 539 ntBASIC2.49□□□□□ -2.01
RB1P06400 NFU1P2-201ENST00000448700 469 ntBASIC2.49□□□□□ -2.01
RB1P06400 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.49□□□□□ -2.01
RB1P06400 SNRPGP7-201ENST00000469016 106 ntBASIC2.49□□□□□ -2.01
RB1P06400 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.49□□□□□ -2.01
RB1P06400 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.49□□□□□ -2.01
RB1P06400 SNORA48.11-201ENST00000517015 89 ntBASIC2.49□□□□□ -2.01
RB1P06400 RNU6-586P-201ENST00000517265 104 ntBASIC2.49□□□□□ -2.01
RB1P06400 AP005902.1-201ENST00000521358 186 ntBASIC2.49□□□□□ -2.01
RB1P06400 SCOCP1-201ENST00000554676 349 ntBASIC2.49□□□□□ -2.01
RB1P06400 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.49□□□□□ -2.01
RB1P06400 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.49□□□□□ -2.01
RB1P06400 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.49□□□□□ -2.01
RB1P06400 AL355297.2-201ENST00000604792 129 ntBASIC2.49□□□□□ -2.01
RB1P06400 AC090517.3-201ENST00000625170 141 ntBASIC2.49□□□□□ -2.01
RB1P06400 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RB1P06400 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
RB1P06400 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
RB1P06400 AP000560.1-201ENST00000624150 1937 ntBASIC2.48□□□□□ -2.01
RB1P06400 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RB1P06400 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RB1P06400 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RB1P06400 RN7SKP61-201ENST00000410642 295 ntBASIC2.48□□□□□ -2.01
RB1P06400 MTCO3P18-201ENST00000440206 761 ntBASIC2.48□□□□□ -2.01
RB1P06400 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.48□□□□□ -2.01
RB1P06400 AL353752.1-201ENST00000454946 260 ntBASIC2.48□□□□□ -2.01
RB1P06400 HMGB3P3-201ENST00000510526 400 ntBASIC2.48□□□□□ -2.01
RB1P06400 RNU5F-2P-201ENST00000516066 82 ntBASIC2.48□□□□□ -2.01
RB1P06400 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
RB1P06400 RNU6-256P-201ENST00000516747 97 ntBASIC2.48□□□□□ -2.01
RB1P06400 RNU6-612P-201ENST00000516909 102 ntBASIC2.48□□□□□ -2.01
RB1P06400 AC026371.1-201ENST00000551867 419 ntBASIC2.48□□□□□ -2.01
RB1P06400 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.48□□□□□ -2.01
RB1P06400 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
RB1P06400 AC068944.2-201ENST00000610373 403 ntBASIC2.48□□□□□ -2.01
RB1P06400 AL160394.1-201ENST00000624765 724 ntBASIC2.48□□□□□ -2.01
RB1P06400 MIR219B-201ENST00000637023 88 ntBASIC2.48□□□□□ -2.01
RB1P06400 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
RB1P06400 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
RB1P06400 RNA5SP99-201ENST00000364020 114 ntBASIC2.47□□□□□ -2.01
RB1P06400 SNORA25.6-201ENST00000364121 118 ntBASIC2.47□□□□□ -2.01
RB1P06400 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.47□□□□□ -2.01
RB1P06400 AC244670.1-201ENST00000436879 112 ntBASIC2.47□□□□□ -2.01
RB1P06400 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.47□□□□□ -2.01
RB1P06400 AMD1P1-201ENST00000457220 922 ntBASIC2.47□□□□□ -2.01
RB1P06400 U8.21-201ENST00000459536 136 ntBASIC2.47□□□□□ -2.01
RB1P06400 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.47□□□□□ -2.01
RB1P06400 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.47□□□□□ -2.01
RB1P06400 AC069439.1-201ENST00000494739 167 ntBASIC2.47□□□□□ -2.01
RB1P06400 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.47□□□□□ -2.01
RB1P06400 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
RB1P06400 RN7SKP256-201ENST00000517201 314 ntBASIC2.47□□□□□ -2.01
RB1P06400 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.47□□□□□ -2.01
RB1P06400 HSPE1P4-201ENST00000550617 308 ntBASIC2.47□□□□□ -2.01
RB1P06400 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
RB1P06400 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RB1P06400 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.47□□□□□ -2.01
RB1P06400 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.47□□□□□ -2.01
RB1P06400 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RB1P06400 snoU2_19.1-201ENST00000362361 80 ntBASIC2.46□□□□□ -2.02
RB1P06400 RNU6-1317P-201ENST00000364582 104 ntBASIC2.46□□□□□ -2.02
RB1P06400 RNU6-1274P-201ENST00000384557 107 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms