Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.3□□□□□ -2.04
VTNP04004 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VTNP04004 Y_RNA.212-201ENST00000364177 102 ntBASIC2.3□□□□□ -2.04
VTNP04004 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VTNP04004 SNORD116-11-201ENST00000383882 92 ntBASIC2.3□□□□□ -2.04
VTNP04004 RNU6-128P-201ENST00000383976 107 ntBASIC2.3□□□□□ -2.04
VTNP04004 RNU6-843P-201ENST00000384454 104 ntBASIC2.3□□□□□ -2.04
VTNP04004 MIR544A-201ENST00000384855 91 ntBASIC2.3□□□□□ -2.04
VTNP04004 MIR218-1-201ENST00000384999 110 ntBASIC2.3□□□□□ -2.04
VTNP04004 RNU6-220P-201ENST00000390919 107 ntBASIC2.3□□□□□ -2.04
VTNP04004 SNORA48.3-201ENST00000391081 134 ntBASIC2.3□□□□□ -2.04
VTNP04004 AL139156.1-201ENST00000412785 841 ntBASIC2.3□□□□□ -2.04
VTNP04004 RPS15AP10-201ENST00000432472 382 ntBASIC2.3□□□□□ -2.04
VTNP04004 AL591806.2-201ENST00000433122 173 ntBASIC2.3□□□□□ -2.04
VTNP04004 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.3□□□□□ -2.04
VTNP04004 MTATP6P23-201ENST00000440153 476 ntBASIC2.3□□□□□ -2.04
VTNP04004 AC124916.1-201ENST00000444020 547 ntBASIC2.3□□□□□ -2.04
VTNP04004 AC046134.1-201ENST00000514454 666 ntBASIC2.3□□□□□ -2.04
VTNP04004 SCARNA3-201ENST00000517097 143 ntBASIC2.3□□□□□ -2.04
VTNP04004 SNORA31.23-201ENST00000517219 133 ntBASIC2.3□□□□□ -2.04
VTNP04004 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.3□□□□□ -2.04
VTNP04004 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.3□□□□□ -2.04
VTNP04004 MIR4524B-201ENST00000581569 115 ntBASIC2.3□□□□□ -2.04
VTNP04004 AC009314.1-201ENST00000603871 304 ntBASIC2.3□□□□□ -2.04
VTNP04004 AC009318.2-201ENST00000610917 651 ntBASIC2.3□□□□□ -2.04
VTNP04004 Y_RNA.783-201ENST00000613546 102 ntBASIC2.3□□□□□ -2.04
VTNP04004 AL449363.1-201ENST00000617815 186 ntBASIC2.3□□□□□ -2.04
VTNP04004 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VTNP04004 AL359854.1-201ENST00000614203 1594 ntBASIC2.3□□□□□ -2.04
VTNP04004 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.3□□□□□ -2.04
VTNP04004 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
VTNP04004 AL109809.4-201ENST00000603520 2185 ntBASIC2.3□□□□□ -2.04
VTNP04004 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.29□□□□□ -2.04
VTNP04004 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.29□□□□□ -2.04
VTNP04004 MTND4P12-201ENST00000498999 1377 ntBASIC2.29□□□□□ -2.04
VTNP04004 OR56A5-201ENST00000340110 738 ntBASIC2.29□□□□□ -2.04
VTNP04004 RNU6-105P-201ENST00000363909 104 ntBASIC2.29□□□□□ -2.04
VTNP04004 Y_RNA.301-201ENST00000364990 103 ntBASIC2.29□□□□□ -2.04
VTNP04004 RNU6-1072P-201ENST00000384703 107 ntBASIC2.29□□□□□ -2.04
VTNP04004 RNU6-443P-201ENST00000384780 107 ntBASIC2.29□□□□□ -2.04
VTNP04004 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VTNP04004 AL117339.3-201ENST00000418733 162 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.29□□□□□ -2.04
VTNP04004 UBE2V1P4-201ENST00000425374 344 ntBASIC2.29□□□□□ -2.04
VTNP04004 RPL30P4-201ENST00000429309 333 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.29□□□□□ -2.04
VTNP04004 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.29□□□□□ -2.04
VTNP04004 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.29□□□□□ -2.04
VTNP04004 RPL9P9-202ENST00000466501 579 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC103851.1-201ENST00000506833 274 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC008526.1-201ENST00000509149 338 ntBASIC2.29□□□□□ -2.04
VTNP04004 RNU6-507P-201ENST00000516045 100 ntBASIC2.29□□□□□ -2.04
VTNP04004 RNU5B-3P-201ENST00000516601 115 ntBASIC2.29□□□□□ -2.04
VTNP04004 RNU6-566P-201ENST00000516790 107 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC134698.4-201ENST00000523451 826 ntBASIC2.29□□□□□ -2.04
VTNP04004 MIR4790-201ENST00000577799 79 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.29□□□□□ -2.04
VTNP04004 AC023043.2-201ENST00000589678 1026 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC243960.4-201ENST00000600532 288 ntBASIC2.29□□□□□ -2.04
VTNP04004 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VTNP04004 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.29□□□□□ -2.04
VTNP04004 AL355073.2-201ENST00000612106 557 ntBASIC2.29□□□□□ -2.04
VTNP04004 AC024581.2-201ENST00000619986 252 ntBASIC2.29□□□□□ -2.04
VTNP04004 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.29□□□□□ -2.04
VTNP04004 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
VTNP04004 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
VTNP04004 AL356292.1-201ENST00000283110 373 ntBASIC2.28□□□□□ -2.04
VTNP04004 Y_RNA.151-201ENST00000363566 112 ntBASIC2.28□□□□□ -2.04
VTNP04004 RNU6-1317P-201ENST00000364582 104 ntBASIC2.28□□□□□ -2.04
VTNP04004 SNORD81.2-201ENST00000365153 76 ntBASIC2.28□□□□□ -2.04
VTNP04004 RNU6-933P-201ENST00000384424 107 ntBASIC2.28□□□□□ -2.04
VTNP04004 RNU6-790P-201ENST00000384479 105 ntBASIC2.28□□□□□ -2.04
VTNP04004 RNU6-692P-201ENST00000384496 107 ntBASIC2.28□□□□□ -2.04
VTNP04004 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.28□□□□□ -2.04
VTNP04004 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.28□□□□□ -2.04
VTNP04004 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.28□□□□□ -2.04
VTNP04004 AC003685.2-201ENST00000422795 395 ntBASIC2.28□□□□□ -2.04
VTNP04004 MTCO3P46-201ENST00000425787 232 ntBASIC2.28□□□□□ -2.04
VTNP04004 Z82205.1-201ENST00000428456 297 ntBASIC2.28□□□□□ -2.04
VTNP04004 USP9YP8-201ENST00000441913 500 ntBASIC2.28□□□□□ -2.04
VTNP04004 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.28□□□□□ -2.04
VTNP04004 MTCO2P3-201ENST00000442543 421 ntBASIC2.28□□□□□ -2.04
VTNP04004 MTND5P20-201ENST00000448677 143 ntBASIC2.28□□□□□ -2.04
VTNP04004 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.28□□□□□ -2.04
VTNP04004 RNU7-187P-201ENST00000458985 68 ntBASIC2.28□□□□□ -2.04
VTNP04004 AC130509.1-201ENST00000464158 433 ntBASIC2.28□□□□□ -2.04
VTNP04004 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
VTNP04004 RNA5SP112-201ENST00000515937 99 ntBASIC2.28□□□□□ -2.04
VTNP04004 RNA5SP454-201ENST00000517231 127 ntBASIC2.28□□□□□ -2.04
VTNP04004 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.28□□□□□ -2.04
VTNP04004 COPS8P3-201ENST00000526024 482 ntBASIC2.28□□□□□ -2.04
VTNP04004 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.28□□□□□ -2.04
VTNP04004 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.28□□□□□ -2.04
VTNP04004 AC023824.2-201ENST00000566185 400 ntBASIC2.28□□□□□ -2.04
VTNP04004 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.28□□□□□ -2.04
VTNP04004 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.28□□□□□ -2.04
VTNP04004 UBE2V2P2-201ENST00000587677 504 ntBASIC2.28□□□□□ -2.04
VTNP04004 AC096772.1-201ENST00000609146 564 ntBASIC2.28□□□□□ -2.04
VTNP04004 AC022306.2-201ENST00000617563 647 ntBASIC2.28□□□□□ -2.04
VTNP04004 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms