Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 IFNA11P-201ENST00000446352 526 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 AL031659.1-201ENST00000447075 539 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.36□□□□□ -2.03
CLPTM1O96005 AC107626.1-201ENST00000471084 183 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 RNU6-612P-201ENST00000516909 102 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 SNORD19.2-201ENST00000516978 73 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 SNORA31.23-201ENST00000517219 133 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 CKS1BP7-201ENST00000522230 235 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 AC010186.2-204ENST00000537668 439 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 AC109446.1-201ENST00000566172 220 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.36□□□□□ -2.03
CLPTM1O96005 AC011494.1-201ENST00000596454 237 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 AP000654.2-201ENST00000605633 586 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CLPTM1O96005 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CLPTM1O96005 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
CLPTM1O96005 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLPTM1O96005 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLPTM1O96005 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLPTM1O96005 Y_RNA.11-201ENST00000362375 109 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 RNU6-593P-201ENST00000364716 112 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 SNORA6-201ENST00000384033 151 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 RNU6-310P-201ENST00000384655 107 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 MIR147B-201ENST00000390185 80 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 SNORA75.4-201ENST00000391278 119 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 RNU6-1050P-201ENST00000410388 107 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC096649.2-201ENST00000416186 393 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC074117.2-201ENST00000417130 397 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC236972.1-201ENST00000433225 199 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC004383.1-201ENST00000438135 289 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC243964.1-201ENST00000441814 261 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC012308.1-201ENST00000451232 178 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 MTCO3P10-201ENST00000455912 772 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 RPL30P15-201ENST00000457129 321 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 SNORD5.1-201ENST00000458800 75 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 U8.21-201ENST00000459536 136 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AP001025.1-201ENST00000486139 332 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 RNU5F-8P-201ENST00000515941 111 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 RNA5SP356-201ENST00000515972 94 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 Y_RNA.708-201ENST00000516950 96 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.35□□□□□ -2.03
CLPTM1O96005 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 CR383656.8-201ENST00000549046 145 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.35□□□□□ -2.03
CLPTM1O96005 CPDP1-201ENST00000579660 283 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.35□□□□□ -2.03
CLPTM1O96005 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.35□□□□□ -2.03
CLPTM1O96005 AC090574.1-201ENST00000623186 233 ntBASIC2.35□□□□□ -2.03
CLPTM1O96005 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CLPTM1O96005 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.35□□□□□ -2.03
CLPTM1O96005 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLPTM1O96005 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
CLPTM1O96005 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLPTM1O96005 MIRLET7G-201ENST00000362280 84 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 RNU6-842P-201ENST00000384269 107 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 MTCYBP4-201ENST00000401524 249 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 RNU2-52P-201ENST00000410680 190 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 Y_RNA.646-201ENST00000410980 101 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.34□□□□□ -2.03
CLPTM1O96005 MTND4P28-201ENST00000426217 387 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AC236972.2-201ENST00000434979 310 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.34□□□□□ -2.03
CLPTM1O96005 DAP3P1-201ENST00000441522 278 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AC007969.2-201ENST00000441891 191 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.34□□□□□ -2.03
CLPTM1O96005 AP001324.2-201ENST00000461163 319 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 RPS29P27-201ENST00000463711 170 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 SNRPGP7-201ENST00000469016 106 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 FO393415.2-201ENST00000480085 343 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 GZMAP1-201ENST00000503054 631 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.03
CLPTM1O96005 RNA5SP384-201ENST00000516615 116 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AP005902.1-201ENST00000521358 186 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AL391813.1-201ENST00000603098 260 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 PISRT1.1-201ENST00000616930 107 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 AC126177.8-201ENST00000618339 1015 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.34□□□□□ -2.03
CLPTM1O96005 AC098657.3-201ENST00000620434 263 ntBASIC2.34□□□□□ -2.03
CLPTM1O96005 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLPTM1O96005 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
CLPTM1O96005 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.34□□□□□ -2.04
CLPTM1O96005 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLPTM1O96005 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
CLPTM1O96005 Y_RNA.2-201ENST00000362330 96 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 Y_RNA.460-201ENST00000384255 102 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 RNU6-843P-201ENST00000384454 104 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 RNU6-748P-201ENST00000384648 107 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 MIR634-201ENST00000385208 97 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 Y_RNA.579-201ENST00000390939 94 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 MTCO2P27-201ENST00000420740 428 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 AF228730.4-201ENST00000421457 183 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 NUP35P1-201ENST00000422734 947 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 WARS2P1-201ENST00000429678 537 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.33□□□□□ -2.04
CLPTM1O96005 IPO7P1-201ENST00000442031 636 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 SNORD109B-201ENST00000458961 67 ntBASIC2.33□□□□□ -2.04
CLPTM1O96005 SNORD109A-201ENST00000459128 67 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms