Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.58□□□□□ -2
RTN3O95197 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTN3O95197 AC092794.1-201ENST00000612734 582 ntBASIC2.58□□□□□ -2
RTN3O95197 MIR203B-201ENST00000636080 86 ntBASIC2.58□□□□□ -2
RTN3O95197 AC100810.6-201ENST00000638068 285 ntBASIC2.58□□□□□ -2
RTN3O95197 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
RTN3O95197 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.58□□□□□ -2
RTN3O95197 RNU6-1317P-201ENST00000364582 104 ntBASIC2.57□□□□□ -2
RTN3O95197 SNORA25B-201ENST00000365507 128 ntBASIC2.57□□□□□ -2
RTN3O95197 RNU1-148P-201ENST00000384472 162 ntBASIC2.57□□□□□ -2
RTN3O95197 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTN3O95197 AL162578.1-201ENST00000406202 378 ntBASIC2.57□□□□□ -2
RTN3O95197 MTCO3P18-201ENST00000440206 761 ntBASIC2.57□□□□□ -2
RTN3O95197 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.57□□□□□ -2
RTN3O95197 AC079804.2-201ENST00000490376 200 ntBASIC2.57□□□□□ -2
RTN3O95197 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.57□□□□□ -2
RTN3O95197 RNU6-1314P-201ENST00000517139 104 ntBASIC2.57□□□□□ -2
RTN3O95197 CYCSP26-201ENST00000534107 320 ntBASIC2.57□□□□□ -2
RTN3O95197 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.57□□□□□ -2
RTN3O95197 AC068944.2-201ENST00000610373 403 ntBASIC2.57□□□□□ -2
RTN3O95197 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTN3O95197 AC069528.2-201ENST00000624849 1991 ntBASIC2.57□□□□□ -2
RTN3O95197 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTN3O95197 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
RTN3O95197 AC005336.3-201ENST00000623833 2679 ntBASIC2.56□□□□□ -2
RTN3O95197 RNU6-933P-201ENST00000384424 107 ntBASIC2.56□□□□□ -2
RTN3O95197 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.56□□□□□ -2
RTN3O95197 AL513185.2-201ENST00000425543 193 ntBASIC2.56□□□□□ -2
RTN3O95197 AL645568.3-201ENST00000433683 316 ntBASIC2.56□□□□□ -2
RTN3O95197 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.56□□□□□ -2
RTN3O95197 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.56□□□□□ -2
RTN3O95197 FGF7P6-202ENST00000451282 293 ntBASIC2.56□□□□□ -2
RTN3O95197 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.56□□□□□ -2
RTN3O95197 RN7SL636P-201ENST00000497504 294 ntBASIC2.56□□□□□ -2
RTN3O95197 AC096745.1-201ENST00000509945 370 ntBASIC2.56□□□□□ -2
RTN3O95197 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
RTN3O95197 AC091874.1-201ENST00000511402 339 ntBASIC2.56□□□□□ -2
RTN3O95197 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.56□□□□□ -2
RTN3O95197 RNU6-256P-201ENST00000516747 97 ntBASIC2.56□□□□□ -2
RTN3O95197 MTND4LP26-201ENST00000518144 282 ntBASIC2.56□□□□□ -2
RTN3O95197 AC018630.3-201ENST00000542637 96 ntBASIC2.56□□□□□ -2
RTN3O95197 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.56□□□□□ -2
RTN3O95197 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.56□□□□□ -2
RTN3O95197 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.56□□□□□ -2
RTN3O95197 SNORD14A-201ENST00000606526 91 ntBASIC2.56□□□□□ -2
RTN3O95197 AC006504.8-201ENST00000621046 635 ntBASIC2.56□□□□□ -2
RTN3O95197 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
RTN3O95197 AC009541.1-201ENST00000438279 2662 ntBASIC2.56□□□□□ -2
RTN3O95197 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.56□□□□□ -2
RTN3O95197 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RTN3O95197 RNU6-944P-201ENST00000364023 107 ntBASIC2.55□□□□□ -2
RTN3O95197 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
RTN3O95197 XGY1-201ENST00000381172 446 ntBASIC2.55□□□□□ -2
RTN3O95197 Y_RNA.504-201ENST00000384481 104 ntBASIC2.55□□□□□ -2
RTN3O95197 SNORA41-201ENST00000384675 132 ntBASIC2.55□□□□□ -2
RTN3O95197 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RTN3O95197 RNU6-325P-201ENST00000411132 105 ntBASIC2.55□□□□□ -2
RTN3O95197 AL030996.1-201ENST00000411430 235 ntBASIC2.55□□□□□ -2
RTN3O95197 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.55□□□□□ -2
RTN3O95197 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.55□□□□□ -2
RTN3O95197 AC010095.1-201ENST00000443543 144 ntBASIC2.55□□□□□ -2
RTN3O95197 RPS29P27-201ENST00000463711 170 ntBASIC2.55□□□□□ -2
RTN3O95197 AC018868.1-201ENST00000491307 315 ntBASIC2.55□□□□□ -2
RTN3O95197 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.55□□□□□ -2
RTN3O95197 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
RTN3O95197 SNORA31.16-201ENST00000516773 139 ntBASIC2.55□□□□□ -2
RTN3O95197 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.55□□□□□ -2
RTN3O95197 AC118273.2-201ENST00000532092 465 ntBASIC2.55□□□□□ -2
RTN3O95197 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.55□□□□□ -2
RTN3O95197 AC021231.3-201ENST00000558497 370 ntBASIC2.55□□□□□ -2
RTN3O95197 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.55□□□□□ -2
RTN3O95197 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.55□□□□□ -2
RTN3O95197 AL138726.1-201ENST00000614873 333 ntBASIC2.55□□□□□ -2
RTN3O95197 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.55□□□□□ -2
RTN3O95197 AL590808.1-201ENST00000618696 141 ntBASIC2.55□□□□□ -2
RTN3O95197 AC009033.1-201ENST00000624279 431 ntBASIC2.55□□□□□ -2
RTN3O95197 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTN3O95197 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
RTN3O95197 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RTN3O95197 RNU4-15P-201ENST00000362613 141 ntBASIC2.54□□□□□ -2
RTN3O95197 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RTN3O95197 RNU6-546P-201ENST00000383991 107 ntBASIC2.54□□□□□ -2
RTN3O95197 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTN3O95197 Y_RNA.597-201ENST00000410463 100 ntBASIC2.54□□□□□ -2
RTN3O95197 RNU2-32P-201ENST00000411193 191 ntBASIC2.54□□□□□ -2
RTN3O95197 EIF1AXP1-201ENST00000419267 435 ntBASIC2.54□□□□□ -2
RTN3O95197 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.54□□□□□ -2
RTN3O95197 MTND3P9-201ENST00000429526 346 ntBASIC2.54□□□□□ -2
RTN3O95197 CBX3P6-201ENST00000430257 527 ntBASIC2.54□□□□□ -2
RTN3O95197 USP9YP28-201ENST00000435142 589 ntBASIC2.54□□□□□ -2
RTN3O95197 RPS12P2-201ENST00000439728 269 ntBASIC2.54□□□□□ -2
RTN3O95197 GPM6BP3-201ENST00000442797 145 ntBASIC2.54□□□□□ -2
RTN3O95197 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.54□□□□□ -2
RTN3O95197 AC104564.1-201ENST00000493028 407 ntBASIC2.54□□□□□ -2
RTN3O95197 HMGB3P3-201ENST00000510526 400 ntBASIC2.54□□□□□ -2
RTN3O95197 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.54□□□□□ -2
RTN3O95197 RNU6-567P-201ENST00000516746 107 ntBASIC2.54□□□□□ -2
RTN3O95197 AC034114.1-201ENST00000520293 285 ntBASIC2.54□□□□□ -2
RTN3O95197 AC021269.2-201ENST00000532318 330 ntBASIC2.54□□□□□ -2
RTN3O95197 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms