Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC005326.1-201ENST00000429197 123 ntBASIC3.46□□□□□ -1.86
CLSTN1O94985 RN7SL863P-201ENST00000462370 296 ntBASIC3.46□□□□□ -1.86
CLSTN1O94985 AC074050.1-201ENST00000563247 211 ntBASIC3.46□□□□□ -1.86
CLSTN1O94985 MIR3923-201ENST00000579521 83 ntBASIC3.46□□□□□ -1.86
CLSTN1O94985 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLSTN1O94985 AL133255.1-201ENST00000606374 441 ntBASIC3.46□□□□□ -1.86
CLSTN1O94985 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLSTN1O94985 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CLSTN1O94985 RNU6-595P-201ENST00000363944 107 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 RNU1-52P-201ENST00000384190 164 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 MIR487A-201ENST00000385009 80 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 Y_RNA.579-201ENST00000390939 94 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 SNORA12-201ENST00000391162 147 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 RNA5SP120-201ENST00000410900 112 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CLSTN1O94985 AF228730.4-201ENST00000421457 183 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 AL358453.1-201ENST00000422522 250 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.45□□□□□ -1.86
CLSTN1O94985 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.45□□□□□ -1.86
CLSTN1O94985 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.45□□□□□ -1.86
CLSTN1O94985 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.45□□□□□ -1.86
CLSTN1O94985 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.45□□□□□ -1.86
CLSTN1O94985 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.45□□□□□ -1.86
CLSTN1O94985 RNA5SP367-201ENST00000516557 118 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 RNU6-586P-201ENST00000517265 104 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 CBX3P7-201ENST00000532876 502 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 AC005899.2-201ENST00000584353 90 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 AL138963.2-201ENST00000605137 226 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 AL050343.2-201ENST00000607338 280 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 AC069234.5-201ENST00000611056 416 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.45□□□□□ -1.86
CLSTN1O94985 AL353743.1-202ENST00000431724 1695 ntBASIC3.45□□□□□ -1.86
CLSTN1O94985 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLSTN1O94985 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLSTN1O94985 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
CLSTN1O94985 RNY1P16-201ENST00000363063 111 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 RNA5SP387-201ENST00000364226 106 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 RNU6-1274P-201ENST00000384557 107 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 Y_RNA.535-201ENST00000384612 99 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 MIR32-201ENST00000384965 70 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 SNORA75.6-201ENST00000391318 127 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 RN7SKP58-201ENST00000411010 305 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 MTCO3P29-201ENST00000432119 779 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.44□□□□□ -1.86
CLSTN1O94985 ELOCP24-201ENST00000456370 334 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 AC093303.1-201ENST00000514549 295 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 SNORA31.15-201ENST00000516771 132 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.44□□□□□ -1.86
CLSTN1O94985 AC016256.1-201ENST00000547971 354 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 AL049779.4-201ENST00000604500 156 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 AC107871.2-201ENST00000612894 502 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 AL359314.1-201ENST00000616913 261 ntBASIC3.44□□□□□ -1.86
CLSTN1O94985 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CLSTN1O94985 AC069528.2-201ENST00000624849 1991 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AC131280.1-202ENST00000624067 4211 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
CLSTN1O94985 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.43□□□□□ -1.86
CLSTN1O94985 RNU6-944P-201ENST00000364023 107 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 MIR549A-201ENST00000385268 96 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CLSTN1O94985 MIR208B-201ENST00000401172 77 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 Y_RNA.597-201ENST00000410463 100 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.43□□□□□ -1.86
CLSTN1O94985 AC022018.1-201ENST00000430685 241 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.43□□□□□ -1.86
CLSTN1O94985 AL161788.1-201ENST00000441805 169 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 MIR2053-201ENST00000459295 91 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 RPL30P10-201ENST00000488148 337 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AC068781.1-201ENST00000488231 618 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.43□□□□□ -1.86
CLSTN1O94985 AC022493.2-201ENST00000506122 481 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 HSPE1P18-201ENST00000517602 280 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.43□□□□□ -1.86
CLSTN1O94985 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.43□□□□□ -1.86
CLSTN1O94985 CYP4A27P-201ENST00000567218 190 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.43□□□□□ -1.86
CLSTN1O94985 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.43□□□□□ -1.86
CLSTN1O94985 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.43□□□□□ -1.86
CLSTN1O94985 AC007179.3-201ENST00000604976 235 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AC096577.2-201ENST00000611455 153 ntBASIC3.43□□□□□ -1.86
CLSTN1O94985 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.43□□□□□ -1.86
CLSTN1O94985 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.43□□□□□ -1.86
CLSTN1O94985 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CLSTN1O94985 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLSTN1O94985 AC000403.1-201ENST00000613696 3585 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 Y_RNA.187-201ENST00000363918 113 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 Y_RNA.333-201ENST00000365274 102 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 Y_RNA.405-201ENST00000383979 100 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 Y_RNA.451-201ENST00000384200 100 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 Y_RNA.524-201ENST00000384564 100 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 Y_RNA.561-201ENST00000384694 100 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 RNU6-1093P-201ENST00000391194 107 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 RNA5SP229-201ENST00000410809 99 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.42□□□□□ -1.86
CLSTN1O94985 AC011816.1-201ENST00000441346 546 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.42□□□□□ -1.86
CLSTN1O94985 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.42□□□□□ -1.86
CLSTN1O94985 snoU13.30-201ENST00000458951 104 ntBASIC3.42□□□□□ -1.86
CLSTN1O94985 AC027575.1-201ENST00000481064 460 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms