Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL607023.1-201ENST00000620045 248 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AL031667.3-201ENST00000620124 655 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AC022513.1-201ENST00000624512 117 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 AL157786.1-207ENST00000627771 695 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SHOX2O60902 MIR924-201ENST00000638017 53 ntBASIC1.14□□□□□ -2.23
SHOX2O60902 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SHOX2O60902 RNU6-371P-201ENST00000364283 108 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 Y_RNA.255-201ENST00000364581 97 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SHOX2O60902 SNORA22-201ENST00000383907 134 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 Y_RNA.390-201ENST00000383932 102 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 SNORA22C-201ENST00000384614 134 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 MIR122-201ENST00000385044 85 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 RNU2-39P-201ENST00000410604 198 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 RNU6-1245P-201ENST00000411130 106 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 RNA5SP111-201ENST00000411386 101 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 EEF1A1P40-201ENST00000412883 573 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 OR6C66P-201ENST00000414917 930 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SHOX2O60902 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
SHOX2O60902 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.13□□□□□ -2.23
SHOX2O60902 AC079448.1-201ENST00000449377 373 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.13□□□□□ -2.23
SHOX2O60902 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.13□□□□□ -2.23
SHOX2O60902 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.13□□□□□ -2.23
SHOX2O60902 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.13□□□□□ -2.23
SHOX2O60902 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.13□□□□□ -2.23
SHOX2O60902 RNU1-86P-201ENST00000516108 154 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 RNU1-107P-201ENST00000516617 154 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 RN7SKP49-201ENST00000516675 260 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 SNORD60.2-201ENST00000516883 86 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.13□□□□□ -2.23
SHOX2O60902 MTND2P7-201ENST00000521337 640 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 SNORA77B-201ENST00000578179 125 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 MIR3136-201ENST00000583498 78 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 AL034555.1-201ENST00000604816 211 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 RNU6-87P-201ENST00000607561 108 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 AL139418.1-201ENST00000613613 177 ntBASIC1.13□□□□□ -2.23
SHOX2O60902 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.13□□□□□ -2.23
SHOX2O60902 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 RNU6-527P-201ENST00000363425 104 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 RNU6-26P-201ENST00000383985 107 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 MIR544A-201ENST00000384855 91 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 MIR558-201ENST00000384920 94 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 MRPL42P2-201ENST00000403169 426 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 RPL21P90-201ENST00000415692 466 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 AC114491.1-201ENST00000416095 246 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.12□□□□□ -2.23
SHOX2O60902 AC123900.1-201ENST00000420390 96 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.12□□□□□ -2.23
SHOX2O60902 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.12□□□□□ -2.23
SHOX2O60902 MTCYBP39-201ENST00000437562 491 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 JTBP1-201ENST00000441314 247 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 HMGN2P18-201ENST00000450680 270 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.12□□□□□ -2.23
SHOX2O60902 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.12□□□□□ -2.23
SHOX2O60902 RPL9P9-202ENST00000466501 579 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 RPL26P26-201ENST00000480251 434 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 AC034244.1-201ENST00000507687 207 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 RNA5SP436-201ENST00000516020 115 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.12□□□□□ -2.23
SHOX2O60902 AC090888.2-201ENST00000559765 1144 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 AC005668.1-201ENST00000571142 476 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 MTATP6P3-201ENST00000581686 676 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 AC007742.2-201ENST00000618226 398 ntBASIC1.12□□□□□ -2.23
SHOX2O60902 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SHOX2O60902 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
SHOX2O60902 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.11□□□□□ -2.23
SHOX2O60902 RNU6-1285P-201ENST00000363480 105 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 RNU6-533P-201ENST00000384144 107 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 SNORA24.1-201ENST00000384401 135 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 RNU6-360P-201ENST00000390944 104 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 RPL21P111-201ENST00000418453 477 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 AL669831.1-202ENST00000428504 417 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 RPS6P15-201ENST00000431996 751 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.11□□□□□ -2.23
SHOX2O60902 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.11□□□□□ -2.23
SHOX2O60902 AC010587.1-201ENST00000505809 469 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.11□□□□□ -2.23
SHOX2O60902 SNORA3.4-201ENST00000515969 96 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 RNU5A-4P-201ENST00000516588 111 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 SUMO2P18-201ENST00000518873 252 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.11□□□□□ -2.23
SHOX2O60902 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.11□□□□□ -2.23
SHOX2O60902 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.11□□□□□ -2.23
SHOX2O60902 AC109446.2-201ENST00000567872 497 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 MIR5094-201ENST00000578766 85 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 AL031281.1-201ENST00000604049 488 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SHOX2O60902 AC131159.1-201ENST00000621854 213 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 AC120349.3-201ENST00000624377 529 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.11□□□□□ -2.23
SHOX2O60902 U4.7-201ENST00000638126 106 ntBASIC1.11□□□□□ -2.23
SHOX2O60902 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
SHOX2O60902 MIR302D-201ENST00000362275 68 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 RNU6-105P-201ENST00000363909 104 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 VTRNA1-3-201ENST00000365645 89 ntBASIC1.1□□□□□ -2.23
SHOX2O60902 RNU6-641P-201ENST00000384006 107 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms