Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ZIC3O60481 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZIC3O60481 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZIC3O60481 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZIC3O60481 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ZIC3O60481 Y_RNA.5-201ENST00000362334 102 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 RNY1P16-201ENST00000363063 111 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 Y_RNA.463-201ENST00000384271 102 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 Y_RNA.504-201ENST00000384481 104 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 MIR186-201ENST00000384988 86 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC3O60481 AC005534.2-201ENST00000431047 433 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AL353997.1-201ENST00000432936 108 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 RPL23AP58-201ENST00000440453 469 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AL137792.2-201ENST00000443484 235 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC3O60481 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC3O60481 AC003982.1-202ENST00000469928 248 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AC068781.1-201ENST00000488231 618 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 RPL17P19-201ENST00000489069 552 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.5□□□□□ -2.01
ZIC3O60481 AC016632.1-201ENST00000503994 196 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AC115990.1-201ENST00000526957 301 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC3O60481 SUB1P3-201ENST00000564581 315 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 MIR4765-201ENST00000585007 77 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
ZIC3O60481 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC3O60481 AC010620.2-201ENST00000600135 313 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 MIR7515-201ENST00000637837 67 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.5□□□□□ -2.01
ZIC3O60481 AL161431.1-201ENST00000618966 4205 ntBASIC2.5□□□□□ -2.01
ZIC3O60481 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ZIC3O60481 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
ZIC3O60481 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.5□□□□□ -2.01
ZIC3O60481 Z75746.1-201ENST00000440243 2080 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.49□□□□□ -2.01
ZIC3O60481 AC092268.1-201ENST00000342691 405 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 RNU6-490P-201ENST00000362985 107 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 RNU5B-2P-201ENST00000363036 113 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 Y_RNA.112-201ENST00000363250 102 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 Y_RNA.128-201ENST00000363391 112 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 SNORA5B-201ENST00000363786 132 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 XGY1-201ENST00000381172 446 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 RNU6-968P-201ENST00000384076 107 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 SNORA29-201ENST00000384183 140 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
ZIC3O60481 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 MIR1302-11-201ENST00000408051 138 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 MIR1302-9-201ENST00000408365 138 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 MIR1302-10-201ENST00000408734 138 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 BMS1P22-201ENST00000414726 313 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 MICF-203ENST00000432679 129 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.49□□□□□ -2.01
ZIC3O60481 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.49□□□□□ -2.01
ZIC3O60481 AC009296.1-201ENST00000443146 155 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.49□□□□□ -2.01
ZIC3O60481 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.49□□□□□ -2.01
ZIC3O60481 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.49□□□□□ -2.01
ZIC3O60481 RPL22P13-201ENST00000493291 347 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 AIG1P1-201ENST00000503376 148 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.49□□□□□ -2.01
ZIC3O60481 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.49□□□□□ -2.01
ZIC3O60481 SNORA25.11-201ENST00000515935 105 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 RNU6-976P-201ENST00000516086 111 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 RNU6-699P-201ENST00000517081 110 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.49□□□□□ -2.01
ZIC3O60481 AC007375.1-201ENST00000554513 578 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 AC020661.2-201ENST00000560114 134 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.49□□□□□ -2.01
ZIC3O60481 MIR4506-201ENST00000584693 77 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 AC073410.2-201ENST00000603240 332 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 RPL23AP88-201ENST00000605759 454 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 MIR1302-2-201ENST00000607096 138 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 AL359198.2-201ENST00000611836 194 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZIC3O60481 AC233981.2-201ENST00000611524 1614 ntBASIC2.49□□□□□ -2.01
ZIC3O60481 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.49□□□□□ -2.01
ZIC3O60481 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
ZIC3O60481 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.48□□□□□ -2.01
ZIC3O60481 MIR26A1-201ENST00000362205 77 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RNU6-212P-201ENST00000362642 104 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 U3.13-201ENST00000364804 214 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RNU6-142P-201ENST00000384019 107 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 SNORA36A-201ENST00000384221 132 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RNU1-57P-201ENST00000384491 166 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AL358453.1-201ENST00000422522 250 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AC018865.2-201ENST00000423631 129 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AC008267.5-201ENST00000424928 265 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.48□□□□□ -2.01
ZIC3O60481 GPM6BP3-201ENST00000442797 145 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.48□□□□□ -2.01
ZIC3O60481 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.48□□□□□ -2.01
ZIC3O60481 RPL30P10-201ENST00000488148 337 ntBASIC2.48□□□□□ -2.01
ZIC3O60481 RPL23AP75-201ENST00000491601 451 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms