Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 SNORA31.11-201ENST00000516528 139 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 RNA5SP82-201ENST00000516707 92 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 RNU6-295P-201ENST00000516901 104 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 HSPE1P4-201ENST00000550617 308 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 AC078814.3-201ENST00000553036 491 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.75□□□□□ -1.97
NPHP1O15259 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP1O15259 MIR3136-201ENST00000583498 78 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 AC010525.2-201ENST00000590920 195 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 DISC2.1-201ENST00000612827 205 ntBASIC2.75□□□□□ -1.97
NPHP1O15259 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP1O15259 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NPHP1O15259 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NPHP1O15259 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP1O15259 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NPHP1O15259 MIR21-201ENST00000362134 72 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 RNU4-15P-201ENST00000362613 141 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 RNU6-1106P-201ENST00000390845 107 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC078809.1-201ENST00000427601 140 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC018634.1-201ENST00000437554 401 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP1O15259 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP1O15259 SNORA31.16-201ENST00000516773 139 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC107953.1-201ENST00000522216 297 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC025423.5-201ENST00000550230 219 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP1O15259 BNIP3P25-201ENST00000596023 559 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP1O15259 AL031274.2-201ENST00000599419 203 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 AC064836.2-201ENST00000609491 462 ntBASIC2.74□□□□□ -1.97
NPHP1O15259 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP1O15259 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NPHP1O15259 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPHP1O15259 Y_RNA.3-201ENST00000362331 103 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 RNU6-142P-201ENST00000384019 107 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 EIF4E2P1-201ENST00000393781 255 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AP000275.1-201ENST00000411943 390 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AL590135.1-201ENST00000422215 156 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AL590556.1-201ENST00000423231 483 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AC019205.3-201ENST00000424573 156 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AL133396.1-201ENST00000432048 687 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP1O15259 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP1O15259 AC016700.2-201ENST00000446011 156 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP1O15259 AC015911.1-201ENST00000495111 156 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AC091874.1-201ENST00000511402 339 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 RPL39P5-202ENST00000512505 151 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 RNU6-965P-201ENST00000516721 96 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AC016957.1-201ENST00000534895 309 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP1O15259 RPS3AP23-202ENST00000574601 686 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 SNRPGP17-201ENST00000603780 214 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AC004492.1-201ENST00000607036 742 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AC009318.2-201ENST00000610917 651 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP1O15259 AC005336.3-201ENST00000623833 2679 ntBASIC2.73□□□□□ -1.97
NPHP1O15259 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NPHP1O15259 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPHP1O15259 Y_RNA.38-201ENST00000362617 102 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 RNU6-451P-201ENST00000362921 107 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 RNU6-1329P-201ENST00000365664 107 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 RNU6-611P-201ENST00000384276 104 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 SNORA26.3-201ENST00000391119 136 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 HMGN2P39-201ENST00000398005 273 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 USP9YP27-201ENST00000418455 438 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 CBX3P6-201ENST00000430257 527 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 AL359672.1-201ENST00000442302 409 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 RNU6-1037P-201ENST00000459571 107 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP1O15259 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.72□□□□□ -1.97
NPHP1O15259 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP1O15259 PRELID2P1-201ENST00000552837 301 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 AC026271.5-201ENST00000577873 130 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 AC011494.1-201ENST00000596454 237 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 AC012557.2-201ENST00000605919 418 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 AC068944.2-201ENST00000610373 403 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.72□□□□□ -1.97
NPHP1O15259 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.71□□□□□ -1.98
NPHP1O15259 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NPHP1O15259 AC092268.1-201ENST00000342691 405 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 RNY3P3-201ENST00000363816 102 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 RNU6-1090P-201ENST00000364065 94 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 SNORA16B-201ENST00000364674 135 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 Y_RNA.338-201ENST00000365320 114 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP1O15259 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP1O15259 AL137159.1-201ENST00000452808 512 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP1O15259 AC083904.1-201ENST00000487828 231 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 AC145146.1-201ENST00000496370 254 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 AC016632.1-201ENST00000503994 196 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 RNA5SP200-201ENST00000516360 103 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 SCARNA16.3-201ENST00000516595 184 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 TPRKBP2-201ENST00000565969 475 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP1O15259 FAM157A-202ENST00000615155 405 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 AL450472.1-202ENST00000637286 180 ntBASIC2.71□□□□□ -1.98
NPHP1O15259 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NPHP1O15259 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms