Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MTND3P4-201ENST00000453537 303 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU1-131P-201ENST00000458943 161 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC074344.1-201ENST00000512823 224 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AL121579.1-201ENST00000555129 305 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC107075.1-201ENST00000613695 314 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 MIR6134-201ENST00000617606 109 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 MIR6516-201ENST00000630554 81 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
CACNA1AO00555 SNORD44.1-201ENST00000363202 61 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 Y_RNA.313-201ENST00000365095 103 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU6-619P-201ENST00000365146 108 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
CACNA1AO00555 MIR7-1-201ENST00000384871 110 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 MIR29B2-201ENST00000385055 81 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 SNORA48.1-201ENST00000390879 135 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNY4P36-201ENST00000391116 96 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU6-754P-201ENST00000391166 107 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC063976.4-201ENST00000421971 163 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 PNRC2P1-201ENST00000423940 420 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC092423.1-201ENST00000430165 186 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC112492.4-201ENST00000456549 352 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC048334.1-201ENST00000477975 159 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RPL30P7-201ENST00000479312 323 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1AO00555 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.05□□□□□ -2.4
CACNA1AO00555 RN7SKP287-201ENST00000516546 266 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 RNU6-678P-201ENST00000516832 109 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 SNORD60.2-201ENST00000516883 86 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AL512310.8-201ENST00000550183 120 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC093249.1-201ENST00000567049 203 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC105129.3-201ENST00000605455 485 ntBASIC0.05□□□□□ -2.4
CACNA1AO00555 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.05□□□□□ -2.4
CACNA1AO00555 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CACNA1AO00555 RNU6-110P-201ENST00000384508 104 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 Y_RNA.566-201ENST00000384735 101 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNA5SP109-201ENST00000391010 116 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNA5SP100-201ENST00000410903 110 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNA5SP59-201ENST00000410922 110 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC019178.2-201ENST00000423595 505 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC092427.1-201ENST00000439177 601 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 MTND1P3-201ENST00000484956 952 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.04□□□□□ -2.4
CACNA1AO00555 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNU6-165P-201ENST00000517170 99 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RN7SKP256-201ENST00000517201 314 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC093519.1-201ENST00000566109 298 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC095057.3-201ENST00000567102 1157 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AP001981.2-201ENST00000603241 418 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC011451.2-201ENST00000604303 598 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 SNRPGP20-201ENST00000604477 205 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC009509.4-201ENST00000619202 509 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 MIR377-201ENST00000362145 69 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNA5SP192-201ENST00000364404 120 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNU6-1019P-201ENST00000364424 107 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNU6-348P-201ENST00000384386 107 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 MIR140-201ENST00000385282 100 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 UBE2V1P15-201ENST00000407776 448 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 SNORD99-201ENST00000408612 74 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AL359704.1-201ENST00000411586 781 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AL606517.1-201ENST00000446914 387 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC009646.1-201ENST00000510455 318 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 SNORA31.2-201ENST00000516019 134 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNU4-54P-201ENST00000516428 129 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNA5SP168-201ENST00000516642 112 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RNU6-197P-201ENST00000516680 100 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.04□□□□□ -2.4
CACNA1AO00555 AC136619.2-201ENST00000563361 631 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 VN1R83P-201ENST00000595685 445 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AL161798.1-201ENST00000604630 131 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 LARP7P1-201ENST00000605576 316 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 AC084824.4-201ENST00000620106 731 ntBASIC0.04□□□□□ -2.4
CACNA1AO00555 RMST_7.1-201ENST00000621935 268 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms