Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SLC28A1O00337 Y_RNA.99-201ENST00000363138 105 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 RNA5SP465-201ENST00000391195 109 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 AL445529.1-201ENST00000398713 389 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 RNA5SP508-201ENST00000411327 119 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC28A1O00337 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC28A1O00337 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.91□□□□□ -2.1
SLC28A1O00337 AC105313.1-201ENST00000509121 353 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.91□□□□□ -2.1
SLC28A1O00337 RNU6-567P-201ENST00000516746 107 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 HSPE1P18-201ENST00000517602 280 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 AP005597.4-201ENST00000526762 229 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.91□□□□□ -2.1
SLC28A1O00337 AC021231.3-201ENST00000558497 370 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 ANP32BP3-201ENST00000559213 706 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 MIR1273D-201ENST00000577266 86 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.91□□□□□ -2.1
SLC28A1O00337 AC078795.3-201ENST00000602913 472 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 AL121757.2-201ENST00000611223 313 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 AL162373.1-201ENST00000620433 407 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.91□□□□□ -2.1
SLC28A1O00337 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
SLC28A1O00337 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SLC28A1O00337 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SLC28A1O00337 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.9□□□□□ -2.11
SLC28A1O00337 AC009487.4-201ENST00000624969 3585 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 Y_RNA.111-201ENST00000363248 100 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 MIR514A2-201ENST00000385131 88 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 MIR514A3-201ENST00000385132 88 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 MIR1283-2-201ENST00000408621 87 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.9□□□□□ -2.11
SLC28A1O00337 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC28A1O00337 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC28A1O00337 SEPT14P3-201ENST00000439401 183 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC28A1O00337 AL732372.2-207ENST00000445840 183 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 SEPT14P2-201ENST00000453405 183 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 PMCHL2-203ENST00000457791 237 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.9□□□□□ -2.11
SLC28A1O00337 AC008628.2-201ENST00000502605 298 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.9□□□□□ -2.11
SLC28A1O00337 AC019235.1-201ENST00000503847 207 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 RPL39P5-202ENST00000512505 151 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 SEPT14P4-201ENST00000513445 186 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 MIR449C-201ENST00000516047 92 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 SNORD60.2-201ENST00000516883 86 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 RNU6-612P-201ENST00000516909 102 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 FO082796.1-201ENST00000523795 183 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 AC245505.1-201ENST00000556398 224 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.9□□□□□ -2.11
SLC28A1O00337 MIR5692C1-201ENST00000585309 91 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 AC068944.2-201ENST00000610373 403 ntBASIC1.9□□□□□ -2.11
SLC28A1O00337 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SLC28A1O00337 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SLC28A1O00337 AC009541.1-201ENST00000438279 2662 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SLC28A1O00337 MTND4P23-201ENST00000447723 1363 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 U3.9-201ENST00000363823 204 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 Y_RNA.231-201ENST00000364358 102 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RNU6-234P-201ENST00000365229 104 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RNU6-26P-201ENST00000383985 107 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 Y_RNA.517-201ENST00000384551 106 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RNU11-3P-201ENST00000391111 133 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RN7SKP32-201ENST00000410167 303 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RNA5SP201-201ENST00000410316 124 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RNA5SP425-201ENST00000410336 112 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SLC28A1O00337 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC28A1O00337 MTND2P29-201ENST00000438595 412 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AL353689.1-201ENST00000438895 199 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC28A1O00337 AL353705.4-201ENST00000449661 238 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RPL23AP3-201ENST00000453844 468 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.89□□□□□ -2.11
SLC28A1O00337 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC28A1O00337 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC28A1O00337 RNU6-1281P-201ENST00000516223 105 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 RNA5SP490-201ENST00000517141 136 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC28A1O00337 AC104576.1-201ENST00000524225 88 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC28A1O00337 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
SLC28A1O00337 HMGB1P33-201ENST00000563485 527 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC28A1O00337 AC109446.1-201ENST00000566172 220 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC28A1O00337 AL162413.1-201ENST00000603198 110 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AL078605.1-201ENST00000603529 500 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 Z98751.3-201ENST00000604447 521 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 AC064836.2-201ENST00000609491 462 ntBASIC1.89□□□□□ -2.11
SLC28A1O00337 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC28A1O00337 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms