Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL357080.1-201ENST00000617394 239 ntBASIC-0.13□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC092268.1-201ENST00000342691 405 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 SNORD51.1-201ENST00000365405 77 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU6-163P-201ENST00000384396 106 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU6-952P-201ENST00000391164 108 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC068533.2-201ENST00000411872 306 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC013262.1-201ENST00000426710 252 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 GTF2IP12-201ENST00000456547 356 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AK3P2-201ENST00000507976 429 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU6-947P-201ENST00000516264 106 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL929325.1-201ENST00000603096 117 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC097065.2-201ENST00000608159 533 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC008147.4-201ENST00000617570 1204 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC106754.2-201ENST00000623006 233 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 OR5AK4P-201ENST00000635912 903 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MIR4315-1-201ENST00000636800 73 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MIR4315-2-201ENST00000640925 73 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.14□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU6-222P-201ENST00000362438 107 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 SNORA75B-201ENST00000384053 137 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 SNORD116-20-201ENST00000384529 92 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL079342.2-201ENST00000403367 482 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU6-177P-201ENST00000411257 104 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MTCO2P1-201ENST00000424648 477 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 DPRXP1-201ENST00000426312 460 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RPL23AP50-201ENST00000434149 455 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 ART2BP-201ENST00000453501 499 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AP000797.1-201ENST00000478870 387 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RPL39P36-201ENST00000490784 156 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC106038.2-201ENST00000520706 568 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AP003072.2-201ENST00000527756 676 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL133153.1-201ENST00000557756 303 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AC012414.2-201ENST00000559474 187 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 AL162730.1-201ENST00000605734 292 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 MIR1264-201ENST00000616374 69 ntBASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.15□□□□□ -2.43
TRBV6-1A0A0K0K1D8 RNU4-15P-201ENST00000362613 141 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 RNA5SP214-201ENST00000363378 118 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 SNORA42.1-201ENST00000363515 137 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 SNORA32.2-201ENST00000384049 122 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 RNU6-815P-201ENST00000384080 113 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 RPL31P35-201ENST00000431058 377 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AL122001.1-201ENST00000457027 370 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 snoU109.2-201ENST00000459316 135 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC010531.2-201ENST00000465012 153 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 HMGN1P12-201ENST00000499125 195 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC114981.1-201ENST00000503897 678 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 MTATP6P9-201ENST00000515039 680 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 RNU6-863P-201ENST00000515989 104 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC007834.2-201ENST00000536310 343 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 SNRPGP1-201ENST00000553864 222 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 BNIP3P9-201ENST00000603714 553 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AL357312.1-201ENST00000603879 298 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC073349.3-201ENST00000617616 186 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC010975.3-201ENST00000618727 978 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 AC078938.1-201ENST00000620993 318 ntBASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.16□□□□□ -2.44
TRBV6-1A0A0K0K1D8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
TRBV6-1A0A0K0K1D8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
TRBV6-1A0A0K0K1D8 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.17□□□□□ -2.44
TRBV6-1A0A0K0K1D8 SNORA33-201ENST00000363664 130 ntBASIC-0.17□□□□□ -2.44
TRBV6-1A0A0K0K1D8 Y_RNA.238-201ENST00000364441 102 ntBASIC-0.17□□□□□ -2.44
TRBV6-1A0A0K0K1D8 SNORA4.3-201ENST00000365564 137 ntBASIC-0.17□□□□□ -2.44
TRBV6-1A0A0K0K1D8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
TRBV6-1A0A0K0K1D8 RNU6-72P-201ENST00000384285 79 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms