Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 ARL5AP1-201ENST00000418991 388 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 NDUFB1P2-201ENST00000449477 176 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-953P-201ENST00000459154 107 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AC048334.1-201ENST00000477975 159 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AC018659.1-201ENST00000551083 169 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 MIR4514-201ENST00000581410 57 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AC091135.1-201ENST00000585943 307 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AC018889.1-201ENST00000605372 397 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 AC097460.3-201ENST00000623099 442 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 PCMTD1P7-201ENST00000634506 357 ntBASIC0.27□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-395P-201ENST00000365662 106 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 SNORA12.2-201ENST00000391040 156 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 UBE2V1P15-201ENST00000407776 448 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 MTND4P20-201ENST00000424125 869 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 MTCO3P29-201ENST00000432119 779 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 AC069257.2-201ENST00000441819 155 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 RPS26P48-201ENST00000491713 339 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 RNY4P37-201ENST00000516225 96 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-150P-201ENST00000516237 95 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 BNIP3P6-201ENST00000549284 499 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 AC087897.1-201ENST00000550134 156 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 AC025423.5-201ENST00000550230 219 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 AL445435.1-201ENST00000604232 665 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 RPL21P136-201ENST00000605378 396 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 AC021506.2-201ENST00000612354 169 ntBASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
TRAV17A0A0B4J275 RNU4-15P-201ENST00000362613 141 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 SNORD3E-201ENST00000362899 217 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 RNU1-96P-201ENST00000364163 162 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 RNU4-12P-201ENST00000365233 139 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 SNORA4.2-201ENST00000365313 147 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 RNA5SP259-201ENST00000365541 109 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-207P-201ENST00000384137 107 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 ELOCP9-201ENST00000418624 239 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 AC245047.7-201ENST00000440265 293 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 ZNF886P-201ENST00000450781 723 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 snoU109.2-201ENST00000459316 135 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 MTND1P3-201ENST00000484956 952 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 MTND2P33-201ENST00000506452 1031 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 MTCO3P28-201ENST00000513351 515 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 RNU5F-2P-201ENST00000516066 82 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 MIR3146-201ENST00000580367 79 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 AL022154.1-201ENST00000604698 785 ntBASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV17A0A0B4J275 AC134026.1-201ENST00000623249 2239 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 U3.8-201ENST00000363675 217 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-853P-201ENST00000364306 107 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-354P-201ENST00000383862 107 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-610P-201ENST00000384264 107 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AL031577.2-201ENST00000404133 280 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 RPS3AP37-201ENST00000419176 745 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AC011233.1-201ENST00000422812 283 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AL035398.1-201ENST00000430869 322 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AL627311.1-201ENST00000431514 115 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 SNRPEP8-201ENST00000442866 260 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AC073910.1-201ENST00000445047 438 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AL122001.1-201ENST00000457027 370 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 RPS26P45-201ENST00000471748 340 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 SNORA43.2-201ENST00000516652 128 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 MIR5708-201ENST00000579723 85 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AC022893.3-201ENST00000607665 437 ntBASIC0.24□□□□□ -2.37
TRAV17A0A0B4J275 AL159152.1-201ENST00000635019 2587 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 SNORA63.3-201ENST00000362682 132 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-289P-201ENST00000364093 107 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-777P-201ENST00000364265 104 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-534P-201ENST00000364877 106 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 RNU6-945P-201ENST00000383947 107 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 SNORA12-201ENST00000391162 147 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AL590556.1-201ENST00000423231 483 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 RPL23AP95-201ENST00000426806 265 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AC007969.2-201ENST00000441891 191 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AP000542.1-201ENST00000448473 371 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 DEFB108A-201ENST00000530110 222 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AC091489.2-201ENST00000566263 604 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 MIR4709-201ENST00000577272 72 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 MIR3912-201ENST00000577566 105 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AL138889.2-201ENST00000603883 242 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AC093913.1-201ENST00000614178 329 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 AC126177.8-201ENST00000618339 1015 ntBASIC0.23□□□□□ -2.37
TRAV17A0A0B4J275 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms