Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RNU6-961P-201ENST00000363893 105 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 SNORD50.2-201ENST00000365465 70 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 Y_RNA.383-201ENST00000383855 97 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 RNU1-73P-201ENST00000383971 164 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 RPL23AP36-201ENST00000413895 458 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AC074117.2-201ENST00000417130 397 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 HMGN2P30-201ENST00000423237 256 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 RPL21P66-201ENST00000426566 466 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 RPL37P4-201ENST00000448908 268 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 RNU6-346P-201ENST00000516288 111 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 MRPS18CP4-201ENST00000535821 231 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 CR383656.8-201ENST00000549046 145 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 EIF4BP1-201ENST00000554881 351 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 MIR5571-201ENST00000577998 113 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AL078605.1-201ENST00000603529 500 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AC019159.1-201ENST00000605094 187 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 AC006001.4-201ENST00000622243 395 ntBASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.48□□□□□ -1.69
RTCBQ9Y3I0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 SNORD74.4-201ENST00000364129 80 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 RNU1-140P-201ENST00000365040 165 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 MIR493-201ENST00000385254 89 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AL358075.3-201ENST00000426289 226 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 POLR2KP2-201ENST00000438155 177 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AC007969.2-201ENST00000441891 191 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 GPM6BP3-201ENST00000442797 145 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 UBE2DNL-203ENST00000474922 222 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AC025445.1-201ENST00000502728 300 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 SNORA40.9-201ENST00000515895 93 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 RPL21P9-201ENST00000556149 474 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 MIR3144-201ENST00000579460 79 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 MIR6134-201ENST00000617606 109 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 AC073349.3-201ENST00000617616 186 ntBASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RTCBQ9Y3I0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RTCBQ9Y3I0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 SNORD115-8-201ENST00000363856 82 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 Y_RNA.304-201ENST00000365011 112 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 SNORD115-38-201ENST00000365037 82 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 RNU1-100P-201ENST00000365255 165 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 Y_RNA.331-201ENST00000365267 102 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 RNU6-394P-201ENST00000410735 107 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 RNA5SP39-201ENST00000411245 120 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 SETP5-201ENST00000437270 562 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 AC006028.1-201ENST00000438379 402 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 AL356535.1-201ENST00000440335 398 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 SNORD2.1-201ENST00000458762 69 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 AC016632.1-201ENST00000503994 196 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 HSPE1P4-201ENST00000550617 308 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 KLKP1-201ENST00000595979 403 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 AC005176.2-201ENST00000596933 147 ntBASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.46□□□□□ -1.7
RTCBQ9Y3I0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RNA5SP197-201ENST00000363357 119 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RNU6-923P-201ENST00000364753 107 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 Y_RNA.435-201ENST00000384095 112 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RNU6-804P-201ENST00000384286 107 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 MIR487A-201ENST00000385009 80 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 MIR1289-1-201ENST00000408836 144 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RNA5SP239-201ENST00000410218 129 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RN7SKP111-201ENST00000410349 271 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AC004552.1-201ENST00000419089 348 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 MRPS10P1-201ENST00000448483 130 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AC125238.1-201ENST00000448842 249 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 S100A11P2-201ENST00000467589 312 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 SNRPGP7-201ENST00000469016 106 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RPS26P3-201ENST00000470205 348 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 RPS4XP22-201ENST00000480755 780 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AC090543.2-201ENST00000483963 348 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 AC004057.1-201ENST00000485827 348 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 MTND5P41-201ENST00000517498 206 ntBASIC4.45□□□□□ -1.7
RTCBQ9Y3I0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms