Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AL691447.3-201ENST00000635020 330 ntBASIC2.32□□□□□ -2.04
MRPS28Q9Y2Q9 AC241585.2-209ENST00000638217 143 ntBASIC2.32□□□□□ -2.04
MRPS28Q9Y2Q9 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
MRPS28Q9Y2Q9 MTND5P10-201ENST00000603719 1809 ntBASIC2.32□□□□□ -2.04
MRPS28Q9Y2Q9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MRPS28Q9Y2Q9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.32□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-461P-201ENST00000364195 107 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 SNORD32A-201ENST00000364805 84 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-843P-201ENST00000384454 104 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-692P-201ENST00000384496 107 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 MIR128-1-201ENST00000384921 82 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 UBA52P6-201ENST00000399822 382 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 MIR548P-201ENST00000408336 84 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AP000275.1-201ENST00000411943 390 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 BX276092.3-201ENST00000424182 230 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 TOMM20P4-201ENST00000427861 435 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AC112220.1-201ENST00000434628 355 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 Y_RNA.631-201ENST00000459607 101 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AC022447.4-201ENST00000504053 364 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-1170P-201ENST00000515974 106 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 SNORA31.15-201ENST00000516771 132 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 SNORA31.18-201ENST00000517043 134 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 ACA59.2-201ENST00000517061 156 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AP005902.1-201ENST00000521358 186 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AL121821.2-201ENST00000556081 394 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AC109446.1-201ENST00000566172 220 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 MIR4635-201ENST00000583759 79 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 CYP2C61P-201ENST00000604072 290 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AC005014.2-201ENST00000607795 599 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 MIR8076-201ENST00000611401 83 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AC097372.5-201ENST00000623665 376 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 AL355596.1-201ENST00000565399 3996 ntBASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MRPS28Q9Y2Q9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 SNORA68.1-201ENST00000364537 132 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-1280P-201ENST00000365211 107 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-622P-201ENST00000384272 103 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 SNORD116-20-201ENST00000384529 92 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 MIR23A-201ENST00000385245 73 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 RNA5SP210-201ENST00000391034 120 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AL591034.2-201ENST00000402839 359 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AC004383.1-201ENST00000438135 289 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AL161651.1-201ENST00000440882 223 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AC011816.1-201ENST00000441346 546 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AP000705.1-201ENST00000454567 350 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 MIR2053-201ENST00000459295 91 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 MED28P2-201ENST00000475771 317 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 FO393415.2-201ENST00000480085 343 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 MRPS36P2-201ENST00000512569 299 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 SNORD19.2-201ENST00000516978 73 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 COX6CP5-201ENST00000527162 228 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AP000889.1-201ENST00000530968 660 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 CBX3P8-201ENST00000532412 525 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AC009163.5-201ENST00000575421 637 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 AP001836.1-201ENST00000604675 523 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
MRPS28Q9Y2Q9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 Y_RNA.252-201ENST00000364556 101 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 DEFA7P-201ENST00000382676 285 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-784P-201ENST00000384330 106 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 RNU6-750P-201ENST00000390946 107 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 RNU2-49P-201ENST00000410666 184 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 EIF4EP2-201ENST00000422816 654 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 RPL23AP95-201ENST00000426806 265 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 MTND3P9-201ENST00000429526 346 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 AL445687.1-201ENST00000439946 251 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 RPS29P26-201ENST00000477483 171 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 AC090525.1-201ENST00000479116 478 ntBASIC2.29□□□□□ -2.04
MRPS28Q9Y2Q9 AC097462.2-201ENST00000504623 481 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms