Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AL591034.1-201ENST00000407447 340 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC023141.4-201ENST00000412031 328 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 BMS1P22-201ENST00000414726 313 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC096649.2-201ENST00000416186 393 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 TBCAP1-201ENST00000436520 327 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC091152.3-201ENST00000604227 325 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 AL034555.1-201ENST00000604816 211 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC069200.1-201ENST00000609511 323 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 MTND1P7-201ENST00000632801 297 ntBASIC4.47□□□□□ -1.69
NOD1Q9Y239 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NOD1Q9Y239 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NOD1Q9Y239 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.47□□□□□ -1.69
NOD1Q9Y239 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
NOD1Q9Y239 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
NOD1Q9Y239 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
NOD1Q9Y239 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NOD1Q9Y239 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.46□□□□□ -1.7
NOD1Q9Y239 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NOD1Q9Y239 Y_RNA.7-201ENST00000362352 102 ntBASIC4.46□□□□□ -1.7
NOD1Q9Y239 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.46□□□□□ -1.7
NOD1Q9Y239 Y_RNA.580-201ENST00000391004 95 ntBASIC4.46□□□□□ -1.7
NOD1Q9Y239 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.46□□□□□ -1.7
NOD1Q9Y239 PPIAP15-201ENST00000479662 484 ntBASIC4.46□□□□□ -1.7
NOD1Q9Y239 RNU6-107P-201ENST00000516643 102 ntBASIC4.46□□□□□ -1.7
NOD1Q9Y239 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.46□□□□□ -1.7
NOD1Q9Y239 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NOD1Q9Y239 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NOD1Q9Y239 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
NOD1Q9Y239 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NOD1Q9Y239 Y_RNA.415-201ENST00000384012 112 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 RNU6-748P-201ENST00000384648 107 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 RNU2-2P-201ENST00000410396 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NOD1Q9Y239 SNORD19.2-201ENST00000516978 73 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 SUMO2P18-201ENST00000518873 252 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 RPS15AP11-201ENST00000594193 385 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 RNU2-4P-201ENST00000606190 192 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.15-201ENST00000611544 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.16-201ENST00000613119 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.12-201ENST00000613778 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.9-201ENST00000615427 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 AL391261.4-201ENST00000616012 481 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.11-201ENST00000616345 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.2-201ENST00000616535 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 MIR6076-201ENST00000617521 113 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.3-201ENST00000617785 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.19-201ENST00000618602 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 RNU2-1-201ENST00000618664 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.6-201ENST00000619225 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.5-201ENST00000619465 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 AC012314.7-201ENST00000619693 93 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 U2.10-201ENST00000620268 191 ntBASIC4.45□□□□□ -1.7
NOD1Q9Y239 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.45□□□□□ -1.7
NOD1Q9Y239 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NOD1Q9Y239 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 RNU6-529P-201ENST00000363383 104 ntBASIC4.44□□□□□ -1.7
NOD1Q9Y239 RNU6-324P-201ENST00000363957 106 ntBASIC4.44□□□□□ -1.7
NOD1Q9Y239 Y_RNA.238-201ENST00000364441 102 ntBASIC4.44□□□□□ -1.7
NOD1Q9Y239 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 AC022795.1-201ENST00000473808 480 ntBASIC4.44□□□□□ -1.7
NOD1Q9Y239 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 RNA5SP179-201ENST00000517284 121 ntBASIC4.44□□□□□ -1.7
NOD1Q9Y239 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 AC009127.3-201ENST00000570531 403 ntBASIC4.44□□□□□ -1.7
NOD1Q9Y239 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 AL161912.2-201ENST00000565707 3007 ntBASIC4.44□□□□□ -1.7
NOD1Q9Y239 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NOD1Q9Y239 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NOD1Q9Y239 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NOD1Q9Y239 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NOD1Q9Y239 AC007496.3-201ENST00000624987 3443 ntBASIC4.43□□□□□ -1.7
NOD1Q9Y239 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
NOD1Q9Y239 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms