Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 MIR4680-201ENST00000580906 66 ntBASIC3.19□□□□□ -1.9
CCNL1Q9UK58 AC136443.5-201ENST00000603741 370 ntBASIC3.19□□□□□ -1.9
CCNL1Q9UK58 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.19□□□□□ -1.9
CCNL1Q9UK58 AC002076.2-201ENST00000617362 122 ntBASIC3.19□□□□□ -1.9
CCNL1Q9UK58 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.19□□□□□ -1.9
CCNL1Q9UK58 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNL1Q9UK58 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCNL1Q9UK58 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNL1Q9UK58 AC022336.2-201ENST00000568966 2538 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 SNORD50.1-201ENST00000362987 71 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 Y_RNA.145-201ENST00000363527 102 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 RNU6-898P-201ENST00000365627 104 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 RNU6-658P-201ENST00000384606 106 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 Y_RNA.645-201ENST00000391229 102 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 AL513475.1-201ENST00000406602 315 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 RPL26P27-201ENST00000414397 437 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.18□□□□□ -1.9
CCNL1Q9UK58 AL391261.3-201ENST00000557194 520 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 LINC00933-203ENST00000559812 219 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 SUB1P3-201ENST00000564581 315 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 MIR4782-201ENST00000577987 79 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 MIR6134-201ENST00000617606 109 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.18□□□□□ -1.9
CCNL1Q9UK58 ZNF72P-201ENST00000425869 1908 ntBASIC3.18□□□□□ -1.9
CCNL1Q9UK58 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCNL1Q9UK58 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 Y_RNA.133-201ENST00000363428 110 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 RNU6-639P-201ENST00000384074 107 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 SNORA1.3-201ENST00000384676 136 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AL079342.1-201ENST00000401460 267 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 U3.37-201ENST00000408528 213 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 SNRPEP4-201ENST00000435815 279 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 Y_RNA.661-201ENST00000516003 99 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 SNORA43.2-201ENST00000516652 128 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 RNU6-988P-201ENST00000519081 107 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AC021269.2-201ENST00000532318 330 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AC009163.5-201ENST00000575421 637 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 MIR5696-201ENST00000578474 85 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AC008737.2-201ENST00000599446 118 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AC010620.2-201ENST00000600135 313 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AC046143.2-201ENST00000609789 160 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 MIR6076-201ENST00000617521 113 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 AP001148.1-201ENST00000624124 2359 ntBASIC3.17□□□□□ -1.9
CCNL1Q9UK58 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.17□□□□□ -1.9
CCNL1Q9UK58 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 RNA5SP295-201ENST00000362655 121 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 Y_RNA.158-201ENST00000363651 101 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 RNU6-790P-201ENST00000384479 105 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 MRPL42P3-201ENST00000401492 326 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AL358176.2-201ENST00000425769 204 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 HMGB3P8-201ENST00000449709 577 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC079354.2-201ENST00000453523 154 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 RPL23AP14-201ENST00000468281 468 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 RNU4-77P-201ENST00000516692 156 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC109479.2-201ENST00000517842 174 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AP000867.2-201ENST00000532468 320 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 BNIP3P16-201ENST00000589779 534 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC104695.3-201ENST00000604052 296 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AL355598.1-201ENST00000604169 202 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 MTND4LP5-201ENST00000605152 292 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 SNORD58B-201ENST00000607313 66 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC083806.3-201ENST00000614016 455 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AC068831.7-201ENST00000616954 363 ntBASIC3.16□□□□□ -1.9
CCNL1Q9UK58 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCNL1Q9UK58 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
CCNL1Q9UK58 CDC27P3-201ENST00000635418 1910 ntBASIC3.15□□□□□ -1.9
CCNL1Q9UK58 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.15□□□□□ -1.9
CCNL1Q9UK58 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCNL1Q9UK58 Y_RNA.80-201ENST00000362996 102 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 RNU6-105P-201ENST00000363909 104 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 RNU1-91P-201ENST00000364746 163 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 RNU5E-7P-201ENST00000365290 117 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 Y_RNA.485-201ENST00000384395 102 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 Y_RNA.533-201ENST00000384596 114 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 AL591034.2-201ENST00000402839 359 ntBASIC3.15□□□□□ -1.91
CCNL1Q9UK58 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms