Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC006130.2-201ENST00000586202 326 ntBASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 SNRPGP20-201ENST00000604477 205 ntBASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 AC091167.4-201ENST00000605079 184 ntBASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 AL110115.1-201ENST00000614396 364 ntBASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 AC092628.2-201ENST00000622492 339 ntBASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 AC091932.3-201ENST00000624223 323 ntBASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SALL4Q9UJQ4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AC004944.1-201ENST00000517807 3059 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 MIR23B-201ENST00000384832 97 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 RN7SKP53-201ENST00000411337 315 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 BMS1P22-201ENST00000414726 313 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 SNORA84-201ENST00000459229 133 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AC146944.2-203ENST00000502493 354 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 HMGB3P3-201ENST00000510526 400 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AC139495.1-202ENST00000513164 354 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 RNU1-61P-201ENST00000516107 151 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 RNA5SP179-201ENST00000517284 121 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AC025946.2-201ENST00000603398 234 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AL162713.1-201ENST00000604480 262 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 AC010733.2-201ENST00000589496 5702 ntBASIC4.12□□□□□ -1.75
SALL4Q9UJQ4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 RNU1-62P-201ENST00000362599 164 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 RNU6-653P-201ENST00000363074 106 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 Y_RNA.272-201ENST00000364696 102 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 RNU6-1117P-201ENST00000384525 104 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 SNORA1.3-201ENST00000384676 136 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 U3.26-201ENST00000391236 204 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 MIR208B-201ENST00000401172 77 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 RPL21P65-201ENST00000406094 466 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 ELOCP21-201ENST00000412558 336 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AL591419.1-201ENST00000427423 339 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AC005300.1-201ENST00000428401 373 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AC091179.3-201ENST00000474761 144 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AC140059.1-201ENST00000489238 361 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AC006445.2-201ENST00000510061 472 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 RNA5SP208-201ENST00000516156 78 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 RNU2-58P-201ENST00000516403 183 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AC105137.2-201ENST00000569073 466 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 MIR3609-201ENST00000582661 80 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AL133393.1-201ENST00000603277 287 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AC006380.1-201ENST00000603598 186 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 MIR6875-201ENST00000617506 72 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 SNORD98-201ENST00000636377 67 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 AL133383.2-201ENST00000622958 2336 ntBASIC4.11□□□□□ -1.75
SALL4Q9UJQ4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 RNU6-270P-201ENST00000364131 105 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 Y_RNA.343-201ENST00000365354 112 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 SNORA18.3-201ENST00000384122 132 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 Y_RNA.571-201ENST00000384753 98 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 MIR549A-201ENST00000385268 96 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 PTMAP5-201ENST00000393073 333 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 RNU2-54P-201ENST00000410299 190 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 BTF3P11-201ENST00000426582 477 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 IFNA11P-201ENST00000446352 526 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AC091153.1-201ENST00000466297 402 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AIG1P1-201ENST00000503376 148 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 RAC1P2-201ENST00000511164 579 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 RNU6-966P-201ENST00000516479 104 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 RNA5SP309-201ENST00000516670 106 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 MIR3923-201ENST00000579521 83 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AC084757.4-201ENST00000616350 526 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 MIR3674-201ENST00000636576 68 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SALL4Q9UJQ4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SALL4Q9UJQ4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms