Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC006386.1-201ENST00000619436 415 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 SNORD98-201ENST00000636377 67 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 AC018630.2-201ENST00000534866 2403 ntBASIC0.68□□□□□ -2.3
VPS29Q9UBQ0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 Y_RNA.46-201ENST00000362695 102 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 RNU6-1285P-201ENST00000363480 105 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 RNA5SP259-201ENST00000365541 109 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 SNORD116-12-201ENST00000384468 92 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 MIR19B1-201ENST00000384829 87 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 SNORA12.2-201ENST00000391040 156 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 COX6CP10-201ENST00000416832 224 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AC006366.1-201ENST00000422002 759 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 SNORA70.22-201ENST00000517160 124 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AC008945.2-201ENST00000606056 604 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AC092106.3-201ENST00000611308 722 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 AP002782.1-201ENST00000623107 614 ntBASIC0.67□□□□□ -2.3
VPS29Q9UBQ0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 MIR337-201ENST00000362281 93 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 RNY4P24-201ENST00000362735 96 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 RNU1-93P-201ENST00000364704 169 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 RNU5E-7P-201ENST00000365290 117 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 Y_RNA.465-201ENST00000384293 102 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 RNU6-298P-201ENST00000390888 96 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AC019070.1-201ENST00000415008 1024 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 MTCO1P21-201ENST00000416634 589 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 MTCYBP39-201ENST00000437562 491 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AC011979.2-201ENST00000527568 352 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 MIR4709-201ENST00000577272 72 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AC097372.5-201ENST00000623665 376 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AL445523.1-201ENST00000451184 1362 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
VPS29Q9UBQ0 RNU6-527P-201ENST00000363425 104 ntBASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 RNU6-142P-201ENST00000384019 107 ntBASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 ERHP2-201ENST00000402323 299 ntBASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 AC123904.2-201ENST00000548059 300 ntBASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 ADI1P3-201ENST00000549509 470 ntBASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 AC103706.2-201ENST00000638080 240 ntBASIC0.65□□□□□ -2.31
VPS29Q9UBQ0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 RNY4P16-201ENST00000364768 94 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AL031779.1-201ENST00000415663 330 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC073910.1-201ENST00000445047 438 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AL360271.2-201ENST00000447710 161 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 RNU1-86P-201ENST00000516108 154 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 RNU7-51P-201ENST00000516560 62 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 RNU1-107P-201ENST00000516617 154 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 RNU6-165P-201ENST00000517170 99 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 MTND2P7-201ENST00000521337 640 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AP002453.2-201ENST00000533503 320 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AL442163.3-201ENST00000554110 156 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC109446.1-201ENST00000566172 220 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC109446.2-201ENST00000567872 497 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 SNORA59B-202ENST00000578183 701 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 MIR3136-201ENST00000583498 78 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 HMGN1P30-201ENST00000589286 268 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 AC012409.4-201ENST00000612923 249 ntBASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VPS29Q9UBQ0 RNA5SP432-201ENST00000362480 116 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 RNU6-433P-201ENST00000363216 104 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 SNORD31B-201ENST00000364977 69 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 SNORA4.2-201ENST00000365313 147 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 USP9YP14-201ENST00000430663 563 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 MTND5P2-201ENST00000442927 1142 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AC016925.1-201ENST00000458303 298 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 491.8 ms