Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AL133216.2-202ENST00000634512 349 ntBASIC3.85□□□□□ -1.79
USP35Q9P2H5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
USP35Q9P2H5 AC009541.1-201ENST00000438279 2662 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP35Q9P2H5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP35Q9P2H5 RNU1-112P-201ENST00000364401 164 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 RNU6-593P-201ENST00000364716 112 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 Y_RNA.303-201ENST00000364998 94 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 U8.8-201ENST00000365399 135 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 MIR517A-201ENST00000385001 87 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 MIR95-201ENST00000385072 81 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 AL590004.2-201ENST00000404787 371 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 AC074085.1-201ENST00000413598 418 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 MTND3P9-201ENST00000429526 346 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.84□□□□□ -1.79
USP35Q9P2H5 HMGB1P18-201ENST00000438801 619 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.84□□□□□ -1.79
USP35Q9P2H5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.84□□□□□ -1.79
USP35Q9P2H5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.84□□□□□ -1.79
USP35Q9P2H5 AC019193.3-201ENST00000609144 554 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 AC008121.3-201ENST00000618726 433 ntBASIC3.84□□□□□ -1.79
USP35Q9P2H5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP35Q9P2H5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP35Q9P2H5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
USP35Q9P2H5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.84□□□□□ -1.8
USP35Q9P2H5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
USP35Q9P2H5 U3.13-201ENST00000364804 214 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 SNORD81.2-201ENST00000365153 76 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 RNU6-142P-201ENST00000384019 107 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 RNU6-790P-201ENST00000384479 105 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 RNU2-63P-201ENST00000410792 194 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 RPS3P1-201ENST00000456781 192 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 UBL5P3-201ENST00000475112 231 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 HMGB1P35-201ENST00000503360 598 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.83□□□□□ -1.8
USP35Q9P2H5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.83□□□□□ -1.8
USP35Q9P2H5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.83□□□□□ -1.8
USP35Q9P2H5 IMMP1LP2-201ENST00000552954 492 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 AC093249.1-201ENST00000567049 203 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 MIR4524B-201ENST00000581569 115 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 AC005730.3-201ENST00000583067 366 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
USP35Q9P2H5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP35Q9P2H5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.83□□□□□ -1.8
USP35Q9P2H5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP35Q9P2H5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
USP35Q9P2H5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP35Q9P2H5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.82□□□□□ -1.8
USP35Q9P2H5 Y_RNA.339-201ENST00000365325 102 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 RNU6-784P-201ENST00000384330 106 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 MIR521-1-201ENST00000384902 87 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 RPL21P75-201ENST00000396599 483 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 RPL21P28-201ENST00000401418 483 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.82□□□□□ -1.8
USP35Q9P2H5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.82□□□□□ -1.8
USP35Q9P2H5 snoU13.26-201ENST00000459452 105 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 RPL21P39-201ENST00000463605 483 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 AC087190.1-201ENST00000484462 480 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 AC093591.1-201ENST00000491435 481 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 AC104564.1-201ENST00000493028 407 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 RPL21P16-201ENST00000495531 483 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.82□□□□□ -1.8
USP35Q9P2H5 RNU1-54P-201ENST00000517181 120 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.82□□□□□ -1.8
USP35Q9P2H5 AC021231.3-201ENST00000558497 370 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 AC060766.3-201ENST00000591442 263 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 AL670379.2-201ENST00000604983 252 ntBASIC3.82□□□□□ -1.8
USP35Q9P2H5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP35Q9P2H5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.81□□□□□ -1.8
USP35Q9P2H5 RNU4-56P-201ENST00000364700 142 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 SNORA9.2-201ENST00000365361 133 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 RNY3P14-201ENST00000384309 102 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 MIR29B2-201ENST00000385055 81 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 RN7SKP158-201ENST00000410453 326 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 AL161788.1-201ENST00000441805 169 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 USP9YP8-201ENST00000441913 500 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 MTND4P18-201ENST00000447010 465 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 AC107399.1-201ENST00000451226 265 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 SNRPGP7-201ENST00000469016 106 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 RPS27P27-201ENST00000498779 255 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 AC107016.2-201ENST00000547968 190 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 AC007375.1-201ENST00000554513 578 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.81□□□□□ -1.8
USP35Q9P2H5 POLR3GP2-201ENST00000588366 668 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 AL138963.2-201ENST00000605137 226 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.81□□□□□ -1.8
USP35Q9P2H5 SNORA43.4-201ENST00000629559 138 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 SNORD98-201ENST00000636377 67 ntBASIC3.81□□□□□ -1.8
USP35Q9P2H5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.81□□□□□ -1.8
USP35Q9P2H5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
USP35Q9P2H5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USP35Q9P2H5 RNU6-859P-201ENST00000362728 107 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 RNU6-596P-201ENST00000365395 98 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 AL353572.1-201ENST00000442490 417 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.8□□□□□ -1.8
USP35Q9P2H5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.8□□□□□ -1.8
USP35Q9P2H5 AC103851.1-201ENST00000506833 274 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 AC116337.1-201ENST00000509680 687 ntBASIC3.8□□□□□ -1.8
USP35Q9P2H5 ACA59.1-201ENST00000515966 143 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms