Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.53□□□□□ -2
SLC6A13Q9NSD5 MIR5571-201ENST00000577998 113 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AC243960.4-201ENST00000600532 288 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AL670379.2-201ENST00000604983 252 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 MIR5739-201ENST00000619803 80 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 SNORA43.4-201ENST00000629559 138 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 AL137790.1-201ENST00000634283 177 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 SNORD98-201ENST00000636377 67 ntBASIC2.53□□□□□ -2
SLC6A13Q9NSD5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
SLC6A13Q9NSD5 MTND4P12-201ENST00000498999 1377 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.142-201ENST00000363491 102 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.504-201ENST00000384481 104 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 SNORA44-201ENST00000384584 132 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AL356057.3-201ENST00000402607 340 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 RPL37P10-201ENST00000412884 288 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC003685.2-201ENST00000422795 395 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC025750.2-201ENST00000442609 450 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC104564.1-201ENST00000493028 407 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 HMGB1P35-201ENST00000503360 598 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 ACA59.1-201ENST00000515966 143 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-1016P-201ENST00000516689 94 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC109329.2-201ENST00000519658 482 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC105029.1-201ENST00000520250 669 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC016256.1-201ENST00000547971 354 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 IMMP1LP2-201ENST00000552954 492 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC007375.1-201ENST00000554513 578 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC021231.3-201ENST00000558497 370 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC023824.2-201ENST00000566185 400 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 MIR4635-201ENST00000583759 79 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AL034555.1-201ENST00000604816 211 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC093732.2-201ENST00000607950 274 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC025253.1-201ENST00000613623 543 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AC009233.1-201ENST00000616477 371 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 AL008636.1-201ENST00000625038 1018 ntBASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC6A13Q9NSD5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.123-201ENST00000363338 102 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 SNORA80A-201ENST00000363922 136 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 RNA5SP240-201ENST00000365355 128 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-784P-201ENST00000384330 106 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 MIR592-201ENST00000384959 97 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-1009P-201ENST00000390996 107 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AL590135.1-201ENST00000422215 156 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC019205.3-201ENST00000424573 156 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 Z82205.1-201ENST00000428456 297 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC236972.1-201ENST00000433225 199 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 GPM6BP3-201ENST00000442797 145 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC016700.2-201ENST00000446011 156 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 SNORD5.1-201ENST00000458800 75 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC090515.1-201ENST00000465295 476 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC015911.1-201ENST00000495111 156 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 MIR7106-201ENST00000612419 65 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC104260.1-201ENST00000616660 539 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC099654.5-201ENST00000636479 350 ntBASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLC6A13Q9NSD5 AC009487.2-201ENST00000420969 6821 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-596P-201ENST00000365395 98 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-142P-201ENST00000384019 107 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.482-201ENST00000384377 111 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.500-201ENST00000384466 111 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.510-201ENST00000384511 114 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-601P-201ENST00000384540 107 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 RNU2-63P-201ENST00000410792 194 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AL353752.1-201ENST00000454946 260 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 RPS3P1-201ENST00000456781 192 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 CYP2C59P-201ENST00000457790 269 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 UBE2DNL-203ENST00000474922 222 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms