Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RNU6-546P-201ENST00000383991 107 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 RNU5A-6P-201ENST00000384136 116 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 RNU6-517P-201ENST00000384362 110 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 Y_RNA.582-201ENST00000391023 95 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 Y_RNA.597-201ENST00000410463 100 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 RNU4-55P-201ENST00000410731 137 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AL117339.3-201ENST00000418733 162 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 RPS15AP10-201ENST00000432472 382 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AL163973.1-201ENST00000484753 577 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 HMGB1P35-201ENST00000503360 598 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 MIR449C-201ENST00000516047 92 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AP001893.2-201ENST00000526949 202 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 uc_338.11-201ENST00000619132 160 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AC068792.1-201ENST00000621354 417 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 MIR1248-201ENST00000629190 106 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AC002543.1-201ENST00000299783 1954 ntBASIC1.48□□□□□ -2.17
HMG20AQ9NP66 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.48□□□□□ -2.17
HMG20AQ9NP66 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNU6-1285P-201ENST00000363480 105 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNU6-43P-201ENST00000384302 107 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNU6-1222P-201ENST00000384615 107 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 MIR518A2-201ENST00000384966 87 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 SNORD73A-201ENST00000386062 65 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 SNORA12-201ENST00000391162 147 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AL645568.3-201ENST00000433683 316 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AL121601.2-201ENST00000438019 707 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RPL7P54-201ENST00000438336 674 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 MTND2P22-201ENST00000444325 1033 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 FDX1P2-201ENST00000450769 375 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AC013470.1-201ENST00000453438 462 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNU7-167P-201ENST00000459160 62 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 HMGB1P29-201ENST00000505659 499 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AC091874.1-201ENST00000511402 339 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RPL39P5-202ENST00000512505 151 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AC010493.1-201ENST00000513479 292 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNU6-970P-201ENST00000516312 107 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNA5SP137-201ENST00000516833 135 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RNU6-85P-201ENST00000605989 107 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 HULC.1-201ENST00000612720 240 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 uc_338.34-201ENST00000617467 174 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.47□□□□□ -2.17
HMG20AQ9NP66 MTND4P14-201ENST00000435799 1354 ntBASIC1.47□□□□□ -2.17
HMG20AQ9NP66 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 RNU4-15P-201ENST00000362613 141 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 Y_RNA.255-201ENST00000364581 97 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 Y_RNA.399-201ENST00000383955 105 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 Y_RNA.480-201ENST00000384364 102 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 MIR583-201ENST00000384846 75 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 RNA5SP219-201ENST00000390940 113 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 RNU2-66P-201ENST00000410650 161 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 RNA5SP450-201ENST00000411206 102 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AL663109.1-201ENST00000411498 844 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AL137159.1-201ENST00000452808 512 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 PRELID3BP1-201ENST00000457142 540 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 RNU1-41P-201ENST00000516161 162 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 RNU1-48P-201ENST00000516400 162 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 SNORA31.16-201ENST00000516773 139 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AL118558.2-201ENST00000556294 238 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 MIR4513-201ENST00000581077 86 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 MIR4424-201ENST00000585257 86 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC004223.2-201ENST00000590309 544 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC091805.2-201ENST00000603848 235 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC009318.2-201ENST00000610917 651 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 Z99129.1-201ENST00000612510 255 ntBASIC1.46□□□□□ -2.18
HMG20AQ9NP66 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.46□□□□□ -2.18
HMG20AQ9NP66 AC005609.4-201ENST00000625071 447 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms