Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 RNU6-472P-201ENST00000384299 107 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 MIR513A2-201ENST00000385249 127 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 U3.26-201ENST00000391236 204 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 MIR208B-201ENST00000401172 77 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 AC108059.2-201ENST00000434626 151 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.74□□□□□ -1.81
SHDQ96IW2 TRBVB-201ENST00000477100 408 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 RPS27P26-201ENST00000494583 239 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.74□□□□□ -1.81
SHDQ96IW2 MIR3668-201ENST00000582138 75 ntBASIC3.74□□□□□ -1.81
SHDQ96IW2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.74□□□□□ -1.81
SHDQ96IW2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.74□□□□□ -1.81
SHDQ96IW2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHDQ96IW2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHDQ96IW2 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.74□□□□□ -1.81
SHDQ96IW2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHDQ96IW2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.73□□□□□ -1.81
SHDQ96IW2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.73□□□□□ -1.81
SHDQ96IW2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.73□□□□□ -1.81
SHDQ96IW2 MAPK10-373ENST00000641983 6772 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SHDQ96IW2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SHDQ96IW2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHDQ96IW2 RNU6-1210P-201ENST00000363775 107 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 RNU6-281P-201ENST00000384212 103 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 RNU1-57P-201ENST00000384491 166 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 RNA5SP213-201ENST00000391031 106 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 RNU1-101P-201ENST00000391171 127 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 RNU6-1093P-201ENST00000391194 107 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 SNORD12B-201ENST00000410433 91 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 AL159169.1-201ENST00000421119 127 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 AC115115.1-201ENST00000449927 248 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.73□□□□□ -1.81
SHDQ96IW2 AC112771.1-201ENST00000463581 102 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 AL049873.1-201ENST00000480540 376 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 AC093663.1-201ENST00000497190 394 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.73□□□□□ -1.81
SHDQ96IW2 UBL5P4-201ENST00000562584 236 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.73□□□□□ -1.81
SHDQ96IW2 YPEL5P2-201ENST00000605553 359 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 AC005520.5-201ENST00000613926 164 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.73□□□□□ -1.81
SHDQ96IW2 AL109809.4-201ENST00000603520 2185 ntBASIC3.73□□□□□ -1.81
SHDQ96IW2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHDQ96IW2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHDQ96IW2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHDQ96IW2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.72□□□□□ -1.81
SHDQ96IW2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHDQ96IW2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHDQ96IW2 Y_RNA.26-201ENST00000362539 101 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 RNU6-655P-201ENST00000362858 107 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 RNU6-529P-201ENST00000363383 104 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 RNU6-799P-201ENST00000363567 107 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 Y_RNA.307-201ENST00000365022 117 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 RNU6-926P-201ENST00000384075 107 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 RNU6-318P-201ENST00000384283 103 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 Y_RNA.500-201ENST00000384466 111 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 MIR186-201ENST00000384988 86 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 AL079342.1-201ENST00000401460 267 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.72□□□□□ -1.81
SHDQ96IW2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.72□□□□□ -1.81
SHDQ96IW2 AC112220.1-201ENST00000434628 355 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 AP000705.1-201ENST00000454567 350 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 RNU6-1132P-201ENST00000459214 107 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 AC008155.2-201ENST00000464337 397 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.72□□□□□ -1.81
SHDQ96IW2 RAC1P2-201ENST00000511164 579 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 RNU6-570P-201ENST00000517051 105 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.72□□□□□ -1.81
SHDQ96IW2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.72□□□□□ -1.81
SHDQ96IW2 AL137849.1-201ENST00000604767 169 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 AL137843.1-201ENST00000605078 385 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 AC090425.1-201ENST00000610007 140 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.72□□□□□ -1.81
SHDQ96IW2 AL359854.1-201ENST00000614203 1594 ntBASIC3.72□□□□□ -1.81
SHDQ96IW2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHDQ96IW2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.71□□□□□ -1.81
SHDQ96IW2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SHDQ96IW2 AC010615.1-201ENST00000594254 1764 ntBASIC3.71□□□□□ -1.81
SHDQ96IW2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHDQ96IW2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHDQ96IW2 Y_RNA.143-201ENST00000363520 106 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 MT-TW-201ENST00000387382 68 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 SNORD115-46-201ENST00000390982 71 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 SNORA48.5-201ENST00000391143 135 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 AP001486.1-201ENST00000463339 476 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 AC007215.1-201ENST00000464893 276 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 RNU6-794P-201ENST00000517261 64 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.71□□□□□ -1.82
SHDQ96IW2 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 CYCSP23-201ENST00000519781 313 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.71□□□□□ -1.82
SHDQ96IW2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.71□□□□□ -1.82
SHDQ96IW2 AC079598.5-201ENST00000547460 117 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 AC023824.2-201ENST00000566185 400 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 KLKP1-201ENST00000595979 403 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 SNRPGP20-201ENST00000604477 205 ntBASIC3.71□□□□□ -1.82
SHDQ96IW2 AC010999.1-201ENST00000611856 324 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms