Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC092447.6-201ENST00000414578 210 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 AC079780.1-201ENST00000428259 207 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 AC133134.1-201ENST00000466800 359 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 RPS26P21-201ENST00000475397 348 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 APOOP4-201ENST00000513530 597 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 RNA5SP341-201ENST00000516261 117 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 MIR4738-201ENST00000579134 87 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 MIR5692A1-201ENST00000580523 69 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 AC243829.7-201ENST00000633081 225 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHFRQ96EP1 MTND5P9-201ENST00000503854 1755 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHFRQ96EP1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHFRQ96EP1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.42□□□□□ -1.86
CHFRQ96EP1 SRP72P2-201ENST00000344851 1979 ntBASIC3.42□□□□□ -1.86
CHFRQ96EP1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHFRQ96EP1 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 RPL9P7-201ENST00000330965 580 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 RNU1-70P-201ENST00000362618 164 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 Y_RNA.44-201ENST00000362676 108 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 Y_RNA.233-201ENST00000364407 101 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 Y_RNA.358-201ENST00000365491 99 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 MIR184-201ENST00000384962 84 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 RNU6-1154P-201ENST00000391001 104 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 AL353621.1-201ENST00000418219 243 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 AC006989.1-201ENST00000427212 131 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 AL513043.1-201ENST00000439124 535 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 U8.22-201ENST00000459141 133 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 RPL9P9-202ENST00000466501 579 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 AC074133.1-201ENST00000515696 183 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 RNU1-86P-201ENST00000516108 154 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 RNU1-107P-201ENST00000516617 154 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 RNU6-914P-201ENST00000516749 109 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 AC109479.2-201ENST00000517842 174 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 AL451007.1-201ENST00000595491 289 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 RMST_8.1-201ENST00000610287 165 ntBASIC3.41□□□□□ -1.86
CHFRQ96EP1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHFRQ96EP1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHFRQ96EP1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHFRQ96EP1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.41□□□□□ -1.86
CHFRQ96EP1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CHFRQ96EP1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.4□□□□□ -1.86
CHFRQ96EP1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
CHFRQ96EP1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHFRQ96EP1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHFRQ96EP1 U3.13-201ENST00000364804 214 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 RNU6-290P-201ENST00000365212 101 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 RNY3P4-201ENST00000384428 101 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 MIR521-1-201ENST00000384902 87 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHFRQ96EP1 RNU6-817P-201ENST00000391083 104 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 SNORA53-201ENST00000391141 249 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 U3.26-201ENST00000391236 204 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 MIR1289-1-201ENST00000408836 144 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 RNA5SP38-201ENST00000410750 119 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 BMS1P22-201ENST00000414726 313 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 AL353705.1-201ENST00000433468 480 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 HIGD1AP2-201ENST00000446367 280 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC234775.1-201ENST00000454247 670 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC087477.1-201ENST00000465747 340 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.4□□□□□ -1.87
CHFRQ96EP1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHFRQ96EP1 RNU6-313P-201ENST00000516317 112 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 RN7SKP258-201ENST00000517151 304 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC025755.1-201ENST00000521306 278 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC023824.2-201ENST00000566185 400 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC240442.1-201ENST00000616055 283 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 MIR6852-201ENST00000621699 66 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CHFRQ96EP1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
CHFRQ96EP1 AC007496.3-201ENST00000624987 3443 ntBASIC3.4□□□□□ -1.87
CHFRQ96EP1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHFRQ96EP1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHFRQ96EP1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHFRQ96EP1 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHFRQ96EP1 Y_RNA.510-201ENST00000384511 114 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 MIR135A2-201ENST00000384854 100 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 RNU6-1168P-201ENST00000390831 104 ntBASIC3.39□□□□□ -1.87
CHFRQ96EP1 MIR190B-201ENST00000401119 79 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms