Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SCARNA4-201ENST00000629045 128 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ERCC4Q92889 AL355596.1-201ENST00000565399 3996 ntBASIC3.57□□□□□ -1.84
ERCC4Q92889 RNU4-50P-201ENST00000364361 141 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ERCC4Q92889 Y_RNA.405-201ENST00000383979 100 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 Y_RNA.451-201ENST00000384200 100 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 Y_RNA.512-201ENST00000384518 102 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 Y_RNA.524-201ENST00000384564 100 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 Y_RNA.561-201ENST00000384694 100 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 SNORA26.7-201ENST00000391288 122 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.56□□□□□ -1.84
ERCC4Q92889 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.56□□□□□ -1.84
ERCC4Q92889 AC108059.2-201ENST00000434626 151 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.56□□□□□ -1.84
ERCC4Q92889 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.56□□□□□ -1.84
ERCC4Q92889 SNORA31.23-201ENST00000517219 133 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 AC034114.1-201ENST00000520293 285 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.56□□□□□ -1.84
ERCC4Q92889 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.56□□□□□ -1.84
ERCC4Q92889 AC010928.2-201ENST00000588017 287 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 RPL23AP78-201ENST00000599928 470 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 AC100812.1-201ENST00000607622 580 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 MIR8062-201ENST00000621515 85 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
ERCC4Q92889 AC009541.1-201ENST00000438279 2662 ntBASIC3.56□□□□□ -1.84
ERCC4Q92889 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERCC4Q92889 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.55□□□□□ -1.84
ERCC4Q92889 MIR208A-201ENST00000362287 71 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 RNU4-9P-201ENST00000364951 139 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 RNU6-1286P-201ENST00000383871 107 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 RNU6-472P-201ENST00000384299 107 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
ERCC4Q92889 RNA5SP344-201ENST00000411081 104 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 ELOCP20-201ENST00000422460 345 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.55□□□□□ -1.84
ERCC4Q92889 CBX3P6-201ENST00000430257 527 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 Z82188.1-201ENST00000436709 154 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AL714022.1-201ENST00000439897 151 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 RPS12P18-201ENST00000442381 270 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.55□□□□□ -1.84
ERCC4Q92889 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.55□□□□□ -1.84
ERCC4Q92889 AP001025.1-201ENST00000486139 332 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 RNU7-175P-201ENST00000515915 61 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 SNORA25.11-201ENST00000515935 105 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AP000867.2-201ENST00000532468 320 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 MRPS36P4-201ENST00000534436 298 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AC090517.1-201ENST00000569307 266 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 RPL23AP88-201ENST00000605759 454 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AC024581.2-201ENST00000619986 252 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 SNORA43.4-201ENST00000629559 138 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AC092435.3-201ENST00000565538 3654 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AC010680.1-201ENST00000590024 3590 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 AL353743.1-202ENST00000431724 1695 ntBASIC3.55□□□□□ -1.84
ERCC4Q92889 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERCC4Q92889 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
ERCC4Q92889 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ERCC4Q92889 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ERCC4Q92889 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.54□□□□□ -1.84
ERCC4Q92889 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERCC4Q92889 RNU1-33P-201ENST00000364249 162 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 SNORA70.4-201ENST00000365509 134 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ERCC4Q92889 SNORA51.11-201ENST00000384442 131 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 SNORA46-201ENST00000384762 135 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.54□□□□□ -1.84
ERCC4Q92889 EIF1AXP1-201ENST00000419267 435 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 DYNLT3P2-201ENST00000442517 295 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 RPL21P10-201ENST00000463521 490 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 RPL23AP75-201ENST00000491601 451 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AC091874.1-201ENST00000511402 339 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.54□□□□□ -1.84
ERCC4Q92889 AC016256.1-201ENST00000547971 354 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AC006199.1-201ENST00000548728 219 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.54□□□□□ -1.84
ERCC4Q92889 AC009163.5-201ENST00000575421 637 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AL390123.1-201ENST00000603216 237 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AC073308.1-201ENST00000623696 305 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ERCC4Q92889 AC233981.2-201ENST00000611524 1614 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 HAUS6P2-201ENST00000433254 2404 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 AC233263.6-201ENST00000631132 1963 ntBASIC3.54□□□□□ -1.84
ERCC4Q92889 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.53□□□□□ -1.84
ERCC4Q92889 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ERCC4Q92889 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ERCC4Q92889 Y_RNA.27-201ENST00000362540 103 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 SNORD115-32-201ENST00000364079 82 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 SNORA14A-201ENST00000364773 135 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 RNU6-1280P-201ENST00000365211 107 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 RNU6-708P-201ENST00000384217 107 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 RNU6-611P-201ENST00000384276 104 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 RNU6-843P-201ENST00000384454 104 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 RNA5SP252-201ENST00000391131 119 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ERCC4Q92889 AL357075.1-201ENST00000404107 726 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.53□□□□□ -1.84
ERCC4Q92889 AC005300.1-201ENST00000428401 373 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 snoU13.30-201ENST00000458951 104 ntBASIC3.53□□□□□ -1.84
ERCC4Q92889 MED28P2-201ENST00000475771 317 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms