Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 AC090897.2-201ENST00000581715 130 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 VN1R91P-201ENST00000594377 169 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 AC016727.2-201ENST00000603988 621 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 SCARNA4-201ENST00000629045 128 ntBASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
ATG4AQ8WYN0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.03□□□□□ -1.93
ATG4AQ8WYN0 AL161431.1-201ENST00000618966 4205 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU6-874P-201ENST00000362390 105 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU1-35P-201ENST00000362782 153 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.153-201ENST00000363615 91 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU6-450P-201ENST00000364654 107 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU6-748P-201ENST00000384648 107 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.557-201ENST00000384680 107 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU6-19P-201ENST00000384718 107 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 MIR591-201ENST00000385290 95 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 SNORA69.1-201ENST00000390904 137 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 MIR190B-201ENST00000401119 79 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNA5SP390-201ENST00000410191 113 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RN7SKP220-201ENST00000410611 288 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 HMGB3P2-201ENST00000411913 584 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AC096649.2-201ENST00000416186 393 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU7-169P-201ENST00000459456 61 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AC107626.1-201ENST00000471084 183 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RN7SL601P-201ENST00000471221 293 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RNU7-175P-201ENST00000515915 61 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AC016256.1-201ENST00000547971 354 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 MIR4506-201ENST00000584693 77 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 RPL23AP78-201ENST00000599928 470 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AC100812.1-201ENST00000607622 580 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AC096577.2-201ENST00000611455 153 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 GABRG2-229ENST00000641017 3628 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 AP003122.5-201ENST00000527668 3766 ntBASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
ATG4AQ8WYN0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 ZNF72P-201ENST00000425869 1908 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 MTND5P1-201ENST00000445440 1375 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AC010889.1-201ENST00000566193 2666 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.405-201ENST00000383979 100 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.451-201ENST00000384200 100 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 RNU6-463P-201ENST00000384340 107 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.524-201ENST00000384564 100 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 RNU6-1222P-201ENST00000384615 107 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.561-201ENST00000384694 100 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 U3.19-201ENST00000390893 196 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 RNU6-750P-201ENST00000390946 107 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 RPS3AP12-201ENST00000443616 753 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AL031183.1-201ENST00000457667 207 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 MTATP8P1-201ENST00000467115 207 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AC104564.1-201ENST00000493028 407 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 RPL22P13-201ENST00000493291 347 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AC093852.1-201ENST00000503587 266 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 RNU6-911P-201ENST00000516523 104 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.706-201ENST00000516933 99 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 Z98751.3-201ENST00000604447 521 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AL161756.2-201ENST00000604597 246 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 RPL23AP88-201ENST00000605759 454 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AL132822.1-201ENST00000617063 513 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 U2.1-201ENST00000618978 145 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 SNORA43.4-201ENST00000629559 138 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 MAPK10-362ENST00000641864 4484 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 AL355596.1-201ENST00000565399 3996 ntBASIC3.01□□□□□ -1.93
ATG4AQ8WYN0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3□□□□□ -1.93
ATG4AQ8WYN0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.106-201ENST00000363189 100 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 SNORD14.1-201ENST00000365609 90 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.380-201ENST00000365663 111 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 RNU6-142P-201ENST00000384019 107 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3□□□□□ -1.93
ATG4AQ8WYN0 AL590004.2-201ENST00000404787 371 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 Y_RNA.592-201ENST00000410274 109 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 RN7SKP61-201ENST00000410642 295 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 AL365496.1-201ENST00000426885 215 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 Z82188.1-201ENST00000436709 154 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 AL353705.4-201ENST00000449661 238 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 snoU13.30-201ENST00000458951 104 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 U8.20-201ENST00000459445 131 ntBASIC3□□□□□ -1.93
ATG4AQ8WYN0 RPL30P1-201ENST00000488676 339 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms