Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RNU6-1016P-201ENST00000516689 94 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-612P-201ENST00000516909 102 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC079598.5-201ENST00000547460 117 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 MIR4672-201ENST00000583126 81 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC078795.3-201ENST00000602913 472 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC018889.1-201ENST00000605372 397 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC098657.3-201ENST00000620434 263 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC104985.2-201ENST00000620598 500 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 AC097372.5-201ENST00000623665 376 ntBASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
SLC44A1Q8WWI5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 AL359854.1-201ENST00000614203 1594 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-227P-201ENST00000362865 103 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 Y_RNA.151-201ENST00000363566 112 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-461P-201ENST00000364195 107 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-596P-201ENST00000365395 98 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-1222P-201ENST00000384615 107 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 RPL23AP95-201ENST00000426806 265 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 AC092427.1-202ENST00000430569 476 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 AL133396.1-201ENST00000432048 687 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 PCMTD1P1-201ENST00000455560 355 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 SNORD5.1-201ENST00000458800 75 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 SMURF2P1-201ENST00000514992 481 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 RNU1-54P-201ENST00000517181 120 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 AP005902.1-201ENST00000521358 186 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 MIR8076-201ENST00000611401 83 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 AL359697.1-201ENST00000624879 587 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 MIR1302-1-201ENST00000637932 143 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 Z82209.1-201ENST00000422141 2135 ntBASIC2.5□□□□□ -2.01
SLC44A1Q8WWI5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 Y_RNA.356-201ENST00000365475 113 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-692P-201ENST00000384496 107 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 RNU2-23P-201ENST00000410545 195 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 SNORD109B-201ENST00000458961 67 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 SNORD109A-201ENST00000459128 67 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 snoU13.14-201ENST00000459372 104 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 MTND4P17-201ENST00000470444 350 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 MIR3117-201ENST00000584034 78 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 C8orf59P2-201ENST00000603441 271 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AC016727.1-205ENST00000605437 569 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AC019193.3-201ENST00000609144 554 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 MIR6128-201ENST00000615528 109 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AC112487.2-201ENST00000637950 304 ntBASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
SLC44A1Q8WWI5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC062016.1-201ENST00000355719 319 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 SNORD114-19-201ENST00000363072 75 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 SNORD32A-201ENST00000364805 84 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-601P-201ENST00000384540 107 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 SNORA41-201ENST00000384675 132 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 RNA5SP184-201ENST00000411071 108 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 NUP35P1-201ENST00000422734 947 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 RPL22P13-201ENST00000493291 347 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC105137.2-201ENST00000569073 466 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC018462.2-201ENST00000605375 395 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AL159153.1-201ENST00000619688 317 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 AC007792.1-201ENST00000623023 402 ntBASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SLC44A1Q8WWI5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 AP000560.1-201ENST00000624150 1937 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-486P-201ENST00000363116 107 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RNU4-73P-201ENST00000363164 141 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-1285P-201ENST00000363480 105 ntBASIC2.47□□□□□ -2.01
SLC44A1Q8WWI5 RNU6-1141P-201ENST00000364520 107 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms