Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC108206.1-201ENST00000570186 4159 ntBASIC3.27□□□□□ -1.89
CCHCR1Q8TD31 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.27□□□□□ -1.89
CCHCR1Q8TD31 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCHCR1Q8TD31 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCHCR1Q8TD31 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RNU6-1309P-201ENST00000363305 108 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.144-201ENST00000363521 113 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.153-201ENST00000363615 91 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 SNORD46.1-201ENST00000364139 104 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RNU4-9P-201ENST00000364951 139 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.389-201ENST00000383924 113 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.405-201ENST00000383979 100 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.451-201ENST00000384200 100 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.524-201ENST00000384564 100 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RNU6-1222P-201ENST00000384615 107 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.561-201ENST00000384694 100 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RNU6-19P-201ENST00000384718 107 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 SNORA69.1-201ENST00000390904 137 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 MIR190B-201ENST00000401119 79 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RN7SKP61-201ENST00000410642 295 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RNA5SP120-201ENST00000410900 112 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC005326.1-201ENST00000429197 123 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC096644.2-201ENST00000429278 159 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 MTCO3P29-201ENST00000432119 779 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RPL21P2-201ENST00000440049 481 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AL031183.1-201ENST00000457667 207 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC091153.1-201ENST00000466297 402 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RPL30P1-201ENST00000488676 339 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC104564.1-201ENST00000493028 407 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC093852.1-201ENST00000503587 266 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 HSBP1P1-201ENST00000555205 166 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC025281.1-201ENST00000567026 265 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC010928.2-201ENST00000588017 287 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 7SK.7-201ENST00000603504 247 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AP000942.4-201ENST00000604811 241 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 RPL23AP88-201ENST00000605759 454 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 AC100812.1-201ENST00000607622 580 ntBASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CCHCR1Q8TD31 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 RNU5B-2P-201ENST00000363036 113 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.380-201ENST00000365663 111 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.424-201ENST00000384063 103 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 SNORA26.7-201ENST00000391288 122 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.592-201ENST00000410274 109 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 RNA5SP274-201ENST00000410484 108 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.605-201ENST00000410577 105 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 AL139281.1-201ENST00000422120 335 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 Z82188.1-201ENST00000436709 154 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 snoU13.30-201ENST00000458951 104 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 U8.20-201ENST00000459445 131 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 RNU7-175P-201ENST00000515915 61 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 RNU6-56P-201ENST00000516986 93 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 MIR5571-201ENST00000577998 113 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 MIR2682-201ENST00000580305 110 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 AL391813.1-201ENST00000603098 260 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 Z98751.3-201ENST00000604447 521 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 RNU6-91P-201ENST00000607774 107 ntBASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.25□□□□□ -1.89
CCHCR1Q8TD31 Y_RNA.106-201ENST00000363189 100 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 RNU6-1285P-201ENST00000363480 105 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 SNORD115-32-201ENST00000364079 82 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 SNORD14.1-201ENST00000365609 90 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 SNORA29-201ENST00000384183 140 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 RNU6-463P-201ENST00000384340 107 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 RNU6-101P-201ENST00000410323 104 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 RNU4-47P-201ENST00000410876 114 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AC078809.1-201ENST00000427601 140 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AC012308.1-201ENST00000451232 178 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 RPL22P13-201ENST00000493291 347 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AC006600.1-201ENST00000572529 153 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AC078899.3-201ENST00000599065 212 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 RPL23AP78-201ENST00000599928 470 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 U2.1-201ENST00000618978 145 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 AL450472.1-202ENST00000637286 180 ntBASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.24□□□□□ -1.89
CCHCR1Q8TD31 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCHCR1Q8TD31 SNORA38.1-201ENST00000364172 131 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms