Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AP000654.2-201ENST00000605633 586 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 MIR340-201ENST00000362125 95 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 RNU4-15P-201ENST00000362613 141 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 RNU6-78P-201ENST00000362897 107 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 RNU6-1285P-201ENST00000363480 105 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 SNORD115.1-201ENST00000391109 76 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 CALM2P2-201ENST00000428512 440 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 RPL37P21-201ENST00000435890 276 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 JTBP1-201ENST00000441314 247 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC079140.2-201ENST00000506193 142 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC104806.1-201ENST00000508720 308 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC116347.2-201ENST00000514912 523 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 MIR449C-201ENST00000516047 92 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 MTND2P7-201ENST00000521337 640 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1□□□□□ -2.25
CCDC112Q8NEF3 RAB11AP2-201ENST00000545905 639 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AP005136.1-201ENST00000579765 429 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC018889.1-201ENST00000605372 397 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AL139286.2-201ENST00000606838 396 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC083806.3-201ENST00000614016 455 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC026585.1-201ENST00000619582 524 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC120349.3-201ENST00000624377 529 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 AC095038.3-201ENST00000634439 195 ntBASIC1□□□□□ -2.25
CCDC112Q8NEF3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CCDC112Q8NEF3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 RNU6-39P-201ENST00000384344 107 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 RNU6-809P-201ENST00000384461 107 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 MIR122-201ENST00000385044 85 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AL357139.1-201ENST00000407792 426 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 C8orf59P1-201ENST00000429930 303 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AC084290.1-201ENST00000434995 374 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 UBE2V1P8-201ENST00000437166 265 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 RPL22P17-201ENST00000438729 315 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 MTND1P30-201ENST00000441241 901 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 HMGN1P13-201ENST00000505795 138 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AL137100.2-201ENST00000555786 315 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 CYP3A52P-201ENST00000563326 91 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AC004492.1-201ENST00000607036 742 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 MIR6857-201ENST00000613267 93 ntBASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.99□□□□□ -2.25
CCDC112Q8NEF3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 RNY1-201ENST00000364228 113 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 SNORA24.1-201ENST00000384401 135 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 RNU6-1222P-201ENST00000384615 107 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 SNORA12-201ENST00000391162 147 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 RAP1BP3-201ENST00000407180 549 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 RBBP4P6-201ENST00000508098 202 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AC016957.1-201ENST00000534895 309 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 MIR5094-201ENST00000578766 85 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 MIR3937-201ENST00000580135 106 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AC008521.1-201ENST00000587471 187 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AC013244.2-201ENST00000603396 103 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AL158050.2-201ENST00000605336 568 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AC104073.3-201ENST00000610942 955 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 RMST_4.1-201ENST00000616886 107 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AC104010.1-201ENST00000616889 150 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AL607023.1-201ENST00000620045 248 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 AC100821.1-201ENST00000523153 2479 ntBASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CCDC112Q8NEF3 MIR544A-201ENST00000384855 91 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 RPL23AP32-201ENST00000395315 459 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 AC123900.1-201ENST00000420390 96 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 RPS27AP14-201ENST00000422868 454 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 AL590556.1-201ENST00000423231 483 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 OR2AQ1P-201ENST00000451972 200 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 SNORA3.4-201ENST00000515969 96 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 AP002453.2-201ENST00000533503 320 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 MIR5697-201ENST00000578045 78 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 AC016727.2-201ENST00000603988 621 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 AL031667.3-201ENST00000620124 655 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 AL157786.1-207ENST00000627771 695 ntBASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC112Q8NEF3 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
CCDC112Q8NEF3 RNU6-660P-201ENST00000364566 109 ntBASIC0.96□□□□□ -2.26
CCDC112Q8NEF3 RNU6-360P-201ENST00000390944 104 ntBASIC0.96□□□□□ -2.26
CCDC112Q8NEF3 MRPL35P1-201ENST00000404272 572 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms