Protein–RNA interactions for Protein: Q5XKR4

OTP, Homeobox protein orthopedia, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTPQ5XKR4 RNU4-49P-201ENST00000516080 140 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 uc_338.14-201ENST00000613162 166 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC093913.1-201ENST00000614178 329 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.82□□□□□ -2.12
OTPQ5XKR4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC009248.2-201ENST00000619826 254 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
OTPQ5XKR4 AC005858.4-201ENST00000623191 700 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 MIR3529-201ENST00000637713 78 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
OTPQ5XKR4 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
OTPQ5XKR4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 Z75746.1-201ENST00000440243 2080 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC010329.5-201ENST00000623497 2174 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 Y_RNA.100-201ENST00000363141 102 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNA5SP138-201ENST00000365098 114 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNU6-1329P-201ENST00000365664 107 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNU6-1083P-201ENST00000384022 107 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNU6-622P-201ENST00000384272 103 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNU6-692P-201ENST00000384496 107 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 MIR544A-201ENST00000384855 91 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 MIR634-201ENST00000385208 97 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNU2-20P-201ENST00000410425 191 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AL356379.1-201ENST00000414105 126 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC009161.1-201ENST00000417306 376 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC097463.2-201ENST00000421074 142 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC243964.1-201ENST00000441814 261 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC007969.2-201ENST00000441891 191 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AL359672.1-201ENST00000442302 409 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AMD1P1-201ENST00000457220 922 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 SNRPGP7-201ENST00000469016 106 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC079804.2-201ENST00000490376 200 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 TRBVA-201ENST00000498804 316 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC008549.1-201ENST00000512900 643 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 SMURF2P1-201ENST00000514992 481 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNU6-256P-201ENST00000516747 97 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RNU6-1088P-201ENST00000516850 104 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC026464.5-201ENST00000562497 722 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 MIR3199-1-201ENST00000582434 88 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 MIR4801-201ENST00000582704 82 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 RBM11P1-201ENST00000604951 799 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
OTPQ5XKR4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.81□□□□□ -2.12
OTPQ5XKR4 AC009033.1-201ENST00000624279 431 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
OTPQ5XKR4 AL359854.1-201ENST00000614203 1594 ntBASIC1.81□□□□□ -2.12
OTPQ5XKR4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
OTPQ5XKR4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
OTPQ5XKR4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
OTPQ5XKR4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
OTPQ5XKR4 SNORA51.11-201ENST00000384442 131 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 MIR17-201ENST00000385012 84 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 CYCSP48-201ENST00000417124 323 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.8□□□□□ -2.12
OTPQ5XKR4 EIF4EP4-201ENST00000424916 578 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 RPL30P4-201ENST00000429309 333 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.8□□□□□ -2.12
OTPQ5XKR4 RPL32P28-201ENST00000443577 397 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC013470.1-201ENST00000453438 462 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.8□□□□□ -2.12
OTPQ5XKR4 RPL31P58-201ENST00000469001 379 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC116353.2-201ENST00000505332 712 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 ANXA2P1-201ENST00000505539 926 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 PRDX4P1-201ENST00000507189 574 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC010486.1-201ENST00000511793 424 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 RN7SKP256-201ENST00000517201 314 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC109479.2-201ENST00000517842 174 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 IGKV3-31-201ENST00000523109 329 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 CYCSP26-201ENST00000534107 320 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC026371.1-201ENST00000551867 419 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 SCOCP1-201ENST00000554676 349 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.8□□□□□ -2.12
OTPQ5XKR4 MIR5571-201ENST00000577998 113 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC011712.1-201ENST00000588959 234 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AL161423.1-201ENST00000613700 262 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AL138726.1-201ENST00000614873 333 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC244517.12-201ENST00000623581 663 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AL133216.2-202ENST00000634512 349 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 AC241585.2-209ENST00000638217 143 ntBASIC1.8□□□□□ -2.12
OTPQ5XKR4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
OTPQ5XKR4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
OTPQ5XKR4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
OTPQ5XKR4 CBX3P1-201ENST00000325243 554 ntBASIC1.79□□□□□ -2.12
OTPQ5XKR4 SNORD114-19-201ENST00000363072 75 ntBASIC1.79□□□□□ -2.12
OTPQ5XKR4 Y_RNA.212-201ENST00000364177 102 ntBASIC1.79□□□□□ -2.12
OTPQ5XKR4 RNA5SP37-201ENST00000365420 130 ntBASIC1.79□□□□□ -2.12
OTPQ5XKR4 RNU6-214P-201ENST00000384130 107 ntBASIC1.79□□□□□ -2.12
OTPQ5XKR4 RNU6-301P-201ENST00000384277 107 ntBASIC1.79□□□□□ -2.12
OTPQ5XKR4 SNORA46.1-201ENST00000391069 153 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms